MirGeneDB 3.0
MirGeneDB ID

Ebu-Mir-10-P2e

Family name MIR-10 (all species)
Seed ACCCGUA
Species Inshore hagfish (Eptatretus burgeri)
MiRBase ID
Paralogues Ebu-Mir-10-P1e  Ebu-Mir-10-P1f  Ebu-Mir-10-P2f  Ebu-Mir-10-P3e  Ebu-Mir-10-P3f 
Orthologues Aae-Mir-10-P2  Adi-Mir-10  Aga-Mir-10-P2  Agr-Mir-10-P2  Asp-Mir-10  Bfl-Mir-10-P2-v1  Bfl-Mir-10-P2-v2  Bge-Mir-10-P2  Bko-Mir-10-P2  Bla-Mir-10-P2-v1  Bla-Mir-10-P2-v2  Bpl-Mir-10-P2  Cbr-Mir-10-P2  Cel-Mir-10-P2  Cin-Mir-10-P2  Cte-Mir-10-P2  Dan-Mir-10-P2  Dgr-Mir-10-P2  Dlo-Mir-10-P2  Dma-Mir-10-P2  Dme-Mir-10-P2  Dmo-Mir-10-P2  Dpu-Mir-10-P2  Dsi-Mir-10-P2  Dya-Mir-10-P2  Eba-Mir-10-P2  Gpa-Mir-10-P2  Gsp-Mir-10-P2  Hru-Mir-10-P2  Isc-Mir-10-P2  Lan-Mir-10-P2  Lgi-Mir-10-P2  Lhy-Mir-10-P2  Llo-Mir-10-P2  Mgi-Mir-10-P2  Mom-Mir-10-P2  Npo-Mir-10-P2  Nve-Mir-10  Obi-Mir-10-P2  Ofu-Mir-10-P2  Ovu-Mir-10-P2  Pau-Mir-10-P2  Pca-Mir-10-P2  Pdu-Mir-10-P2  Pfl-Mir-10-P2  Ple-Mir-10-P2  Pmi-Mir-10-P2  Pve-Mir-10-P2  Rph-Mir-10-P2  Sko-Mir-10-P2  Snu-Mir-10-P2  Tca-Mir-10-P2  Tur-Mir-10-P2  Xbo-Mir-10-P2  Xbo-Mir-10-P2-as 
Node of Origin (locus) E. burgeri
Node of Origin (family) Eumetazoa
Genome context
(Eburgeri_3)		 FYBX02009032.1: 3776594-3776654 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGGAGUGAGACCUUCCAGCCGCCCCCUUACAACCCGUAGAUCCGAACUUGUGCUCUCUUCCUGGCUGUGCAAGGUCGUGCCUAUGGGUAGUGUGUGGUCGGACAACGCCUUCUUCUUGUUC
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Structure
        10          20        30        40        50          
GGGAGUGAGACCUUCCAG--|  C  CCU   A        AUC   A      CUCUCUU 
                    CCG CC   UAC ACCCGUAG   CGA CUUGUG       \
                    GGC GG   GUG UGGGUAUC   GCU GAACGU       C
CUUGUUCUUCUUCCGCAACA^  U  UGU   A        CGU   G      GUCGGUC 
 .       110       100        90        80        70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Ebu-Mir-10-P2e_5p
mirBase accessionNone
Sequence 
0- AACCCGUAGAUCCGAACUUGUG -22
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Star sequence

Ebu-Mir-10-P2e_3p* (predicted)
mirBase accessionNone
Sequence 
39- CAAGGUCGUGCCUAUGGGUAGU -61
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