MirGeneDB 3.0
MirGeneDB ID

Ebu-Mir-29-P1e

Family name MIR-29 (all species)
Seed AGCACCA
Species Inshore hagfish (Eptatretus burgeri)
MiRBase ID
Paralogues Ebu-Mir-29-P1f  Ebu-Mir-29-P2e  Ebu-Mir-29-P2f 
Orthologues Aae-Mir-29-P1  Aga-Mir-29-P1  Agr-Mir-29-P1  Asu-Mir-29-P1  Bfl-Mir-29-P1  Bla-Mir-29-P1  Cbr-Mir-29-P1  Cel-Mir-29-P1  Cin-Mir-29-o1  Csc-Mir-29-P1  Cte-Mir-29-P1  Dan-Mir-29-P1  Dgr-Mir-29-P1  Dlo-Mir-29-P1  Dma-Mir-29-P1  Dme-Mir-29-P1  Dmo-Mir-29-P1  Dpu-Mir-29-P1  Dsi-Mir-29-P1  Dya-Mir-29-P1  Eba-Mir-29-P1  Esc-Mir-29-P1  Gpa-Mir-29-P1  Gsp-Mir-29  Hme-Mir-29-P1  Hru-Mir-29-P1  Isc-Mir-29-P1  Lhy-Mir-29-P1  Llo-Mir-29-P1  Mgi-Mir-29-P1  Mom-Mir-29-P1  Npo-Mir-29-P1  Obi-Mir-29-P1  Ofu-Mir-29-P1  Ovu-Mir-29-P1  Pau-Mir-29-P1  Pcr-Mir-29-P1  Pdu-Mir-29-P1  Pfl-Mir-29-P1  Pmi-Mir-29-P1  Pve-Mir-29-P1  Rph-Mir-29-P1  Sko-Mir-29-P1  Snu-Mir-29-P1  Spu-Mir-29-P1  Tca-Mir-29-P1  Tur-Mir-29-P1  War-Mir-29-P1  Xbo-Mir-29-P1 
Node of Origin (locus) E. burgeri
Node of Origin (family) Bilateria
Genome context
(Eburgeri_3)		 FYBX02009700.1: 6564-6626 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUACAAGACCGUCGCUCUCUUUUCUCGGAAACUGGUUUCACAUGGUGAAGUAGAUACAGCGACAUCUUGUCUAGCACCAUAUGAAAUCAGUGUUCUUGGAGACGAGAUAUCAUCGUGGAAAAU
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Structure
        10         20        30         40        50        60  
CUACAAGACCGUCGCUC-  U     C    -|         C      AAG    UACAGCG 
                  UC UUUCU GGAA ACUGGUUUCA AUGGUG   UAGA       \
                  AG AGAGG UCUU UGACUAAAGU UACCAC   AUCU       A
UAAAAGGUGCUACUAUAG  C     U    G^         A      G--    GUUCUAC 
 120       110       100        90        80          70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Ebu-Mir-29-P1e_5p*
mirBase accessionNone
Sequence 
0- ACUGGUUUCACAUGGUGAAGUAGA -24
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Mature sequence

Ebu-Mir-29-P1e_3p (predicted)
mirBase accessionNone
Sequence 
41- UAGCACCAUAUGAAAUCAGUGU -63
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