MirGeneDB 3.0
MirGeneDB ID

Eca-Mir-1180

Family name MIR-1180 (all species)
Seed UUCCGGC
Species Horse (Equus caballus)
MiRBase ID eca-mir-1180
Paralogues
Orthologues Cja-Mir-1180  Hsa-Mir-1180  Mml-Mir-1180  Mmr-Mir-1180  Pab-Mir-1180 
Node of Origin (locus) Boreoeutheria
Node of Origin (family) Boreoeutheria
Genome context
(GCA_002863925.1_EquCab3.0)		 CM009158.1: 59580512-59580567 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGUGGCUCUGGGACAAAGCCCGUGUCUGCCUGGCCCACCCAGCCGGGAAUAGUGCACGAGUUUGUUUCCGGCUCGAGUGGGUGUGUCGGAGGCGAGGCUGCUGCUCCCGAAGGAGC
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Structure
        10         20         30        40         50       
GGUGGCUCUGGGACAAA-   -   G    CCUG      CC-|          GUGCA 
                  GCC CGU UCUG    GCCCAC   AGCCGGGAAUA     \
                  CGG GCG AGGC    UGGGUG   UCGGCCUUUGU     C
CGAGGAAGCCCUCGUCGU   A   G    UGUG      AGC^          UUGAG 
    110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er
Star sequence

Eca-Mir-1180_5p* (predicted)
mirBase accessionNone
Sequence 
0- UGGCCCACCCAGCCGGGAAUA -21
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Mature sequence

Eca-Mir-1180_3p
mirBase accessionMIMAT0013020
Sequence 
34- UUUCCGGCUCGAGUGGGUGUGU -56
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