MirGeneDB 2.1

MirGeneDB ID

Mml-Mir-1180

Family name MIR-1180 (all species)
Seed UUCCGGC
Species Rhesus monkey (Macaca mulatta)
MiRBase ID mml-mir-1180
Paralogues
Orthologues Hsa-Mir-1180 
Node of Origin (locus) Catarrhini
Node of Origin (family) Catarrhini
Genome context
(rheMac8_trace)
chr16: 19142309-19142364 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGUCCCGGCGGGGCGAAGCCCGCGGCUGCCGGACCCACCCGGCCGGGAAUAGUGCUCCUGGUUGUUUCCGGCUCGCGUGGGUGUGUCGGCGGCGGGGCCUGACACCCCCGGCCUCC
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Structure
        10          20        30        40         50       
AGUCCCGGCGGGGCGAAG--     G    C  G      C  -|         GUGCU 
                    CCCGC GCUG CG ACCCAC CG GCCGGGAAUA     \
                    GGGCG CGGC GU UGGGUG GC CGGCCUUUGU     C
CCUCCGGCCCCCACAGUCCG     G    U  G      C  U^         UGGUC 
    110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
 +
Bo Br Br Br He Ki Li Lu Ly Sk Sp Te Th
Star sequence

Mml-Mir-1180_5p*

mirBase accessionMIMAT0028264
Sequence
0- GGACCCACCCGGCCGGGAAUA -21
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Proposed targets TargetScanVert: mml-miR-1180-5p
Mature sequence

Mml-Mir-1180_3p

mirBase accessionMIMAT0028265
Sequence
34- UUUCCGGCUCGCGUGGGUGUGU -56
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Proposed targets TargetScanVert: mml-miR-1180-3p