MirGeneDB 3.0
MirGeneDB ID

Eca-Mir-1296

Family name MIR-1296 (all species)
Seed UAGGGCC
Species Horse (Equus caballus)
MiRBase ID eca-mir-1296
Paralogues
Orthologues Bta-Mir-1296  Cfa-Mir-1296  Cja-Mir-1296  Cpo-Mir-1296  Dno-Mir-1296  Ete-Mir-1296  Hsa-Mir-1296  Laf-Mir-1296  Mml-Mir-1296  Mmr-Mir-1296  Ocu-Mir-1296  Pab-Mir-1296 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_002863925.1_EquCab3.0)		 CM009148.1: 52846600-52846664 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGAAAUCAACGAAUCACCUACCUAACUGGGUUAGGGCCCUGGCUCCAUCUCCUUUAGGAAAACCUUCUUUGGGGAGUGGGGCUUCGACCCUAACCCAGCUGGGCUGUAACACUGCUGCAUUUUCU
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Structure
        10        20          30        40        50        60  
UGAAAUCAACGAAUCACCUA--|   A           CCCU       U     UUAGGAAA 
                      CCUA CUGGGUUAGGG    GGCUCCA CUCCU        A
                      GGGU GACCCAAUCCC    UCGGGGU GAGGG        C
UCUUUUACGUCGUCACAAUGUC^   C           AGCU       -     GUUUCUUC 
   120       110       100        90        80         70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er
Mature sequence

Eca-Mir-1296_5p
mirBase accessionMIMAT0012890
Sequence 
0- UUAGGGCCCUGGCUCCAUCUCCU -23
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Star sequence

Eca-Mir-1296_3p* (predicted)
mirBase accessionNone
Sequence 
44- AGUGGGGCUUCGACCCUAACC -65
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