MirGeneDB 3.0
MirGeneDB ID

Pab-Mir-1296

Family name MIR-1296 (all species)
Seed UAGGGCC
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues
Orthologues Bta-Mir-1296  Cfa-Mir-1296  Cja-Mir-1296  Cpo-Mir-1296  Dno-Mir-1296  Eca-Mir-1296  Ete-Mir-1296  Hsa-Mir-1296  Laf-Mir-1296  Mml-Mir-1296  Mmr-Mir-1296  Ocu-Mir-1296 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)		 CM054687.2: 80862708-80862772 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGAAAUCAACGAAUCACCUACCUAACUGGGUUAGGGCCCUGGCUCCAUCUCCUUUAGGAAAACCUUCUGUGGGGAGUGGGGCUUCGACCCUAACCCAGGUGGGCUGUAACACUGCUGUAUUUUCU
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Structure
        10        20          30        40        50        60  
UGAAAUCAACGAAUCACCUA--|   A           CCCU       U    UUUAGGAAA 
                      CCUA CUGGGUUAGGG    GGCUCCA CUCC         A
                      GGGU GACCCAAUCCC    UCGGGGU GAGG         C
UCUUUUAUGUCGUCACAAUGUC^   G           AGCU       -    GGUGUCUUC 
   120       110       100        90        80         70
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Br Li Li
Mature sequence

Pab-Mir-1296_5p (predicted)
mirBase accessionNone
Sequence 
0- UUAGGGCCCUGGCUCCAUCUCC -22
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Star sequence

Pab-Mir-1296_3p* (predicted)
mirBase accessionNone
Sequence 
44- AGUGGGGCUUCGACCCUAACC -65
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