| MirGeneDB ID | Eca-Mir-325 |
|---|
| Family name |
MIR-325 (all species) |
|---|
| Seed |
UUAUUGA |
|---|
| Species |
Horse (Equus caballus) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Cfa-Mir-325
Hsa-Mir-325
Laf-Mir-325
Mdo-Mir-325
Mml-Mir-325
Mmr-Mir-325
Mmu-Mir-325
Ocu-Mir-325
Pab-Mir-325
Rno-Mir-325
Sha-Mir-325
|
|---|
| Node of Origin (locus) |
Theria
|
|---|
| Node of Origin (family) |
Theria
|
|---|
Genome context
(GCA_002863925.1_EquCab3.0) |
CM009179.1: 60292477-60292536 [-]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
AUUCUAAAAGAGCCGCUACAGUGCUUGGUUCCUAGUAGGUGUUCAGUAAGUGUUUGUGACAUAAUUCGUUUAUUGAGCACCUCCUAUCAAUCAAGCACUGUUCUAGGCUCUGGGACCACA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AUUCUAAAAGAGCCGCU--| CC U UUUGUG
ACAGUGCUUGGUU UAG AGGUGUUCAGUAAGUG A
UGUCACGAACUAA AUC UCCACGAGUUAUUUGC C
ACACCAGGGUCUCGGAUCU^ CU C UUAAUA
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
| Ps |
Bo |
Ca |
Em |
En |
En |
En |
En |
En |
En |
En |
Gl |
He |
He |
Ho |
Im |
Ki |
Li |
Lo |
Lu |
Ma |
Ma |
Mi |
Pl |
Sp |
Te |
Tr |
Ut |
Ut |
Yo |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|---|
| Star sequence |
Eca-Mir-325_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- CCUAGUAGGUGUUCAGUAAGUG -22
Get sequence
|
|---|
| Mature sequence |
Eca-Mir-325_3p |
| mirBase accession | None |
|---|
| Sequence |
38- UUUAUUGAGCACCUCCUAUCAA -60
Get sequence
|
|---|
