| MirGeneDB ID | Laf-Mir-325 |
|---|
| Family name |
MIR-325 (all species) |
|---|
| Seed |
CUAGUAG |
|---|
| Species |
African bush elephant (Loxodonta africana) |
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| MiRBase ID |
|
|---|
| Paralogues |
|
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| Orthologues |
Cfa-Mir-325
Eca-Mir-325
Hsa-Mir-325
Mdo-Mir-325
Mml-Mir-325
Mmr-Mir-325
Mmu-Mir-325
Ocu-Mir-325
Pab-Mir-325
Rno-Mir-325
Sha-Mir-325
|
|---|
| Node of Origin (locus) |
Theria
|
|---|
| Node of Origin (family) |
Theria
|
|---|
Genome context
(GCA_000001905.1_Loxafr3.0) |
GL010051.1: 24640232-24640291 [+]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
AUUCUAACAGAAUCUCUUCAGUGCUUGGUUCCUAGUAGGUGUUCAAUAAGUGUUUGUGACAUAAUUCACUUAUUGAGCACCUCCUAUCAAUAAAGUACUGUGUUAGGCUUUGGAAUCAUG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AUUCUAACAGAAUCUCUU--| G CC U UUUGUG
CAGUGCUU GUU UAG AGGUGUUCAAUAAGUG A
GUCAUGAA UAA AUC UCCACGAGUUAUUCAC C
GUACUAAGGUUUCGGAUUGU^ A CU C UUAAUA
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
|
|---|
| 3' NTU |
Unknown
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Laf-Mir-325_5p (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- CCUAGUAGGUGUUCAAUAAGUG -22
Get sequence
|
|---|
| Co-mature sequence |
Laf-Mir-325_3p (predicted) |
| mirBase accession | None |
|---|
| Sequence |
38- CUUAUUGAGCACCUCCUAUCAA -60
Get sequence
|
|---|
