MirGeneDB ID | Pab-Mir-325 |
Family name |
MIR-325 (all species) |
Seed |
UUAUUGA |
Species |
Sumatran orangutan (Pongo abelii) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Cfa-Mir-325
Eca-Mir-325
Hsa-Mir-325
Laf-Mir-325
Mdo-Mir-325
Mml-Mir-325
Mmr-Mir-325
Mmu-Mir-325
Ocu-Mir-325
Rno-Mir-325
Sha-Mir-325
|
Node of Origin (locus) |
Theria
|
Node of Origin (family) |
Theria
|
Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054702.2: 81913495-81913554 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
AAGUCCACAGAACCAAUACAGUGCUUGGUUCCUAGUAGGUGUCCAGUAAGUGUUUGUGACGUAAUUUGCUUAUUGAGGACCUCCUAUCAAUCAAGCACUGUGCUAGGCUCUGGGACUACA
Get precursor sequence
|
Structure | 10 20 30 40 50
AAGUCCACAGAACCAAU--| CC U G - UUUGUG
ACAGUGCUUGGUU UAG AGGU UC CAGUAAGUG A
UGUCACGAACUAA AUC UCCA GG GUUAUUCGU C
ACAUCAGGGUCUCGGAUCG^ CU C - A UUAAUG
. 110 100 90 80 70 60 |
Deep sequencing |
|
3' NTU |
Unknown
|
Motifs | No |
Tissue expression
|
|
Star sequence |
Pab-Mir-325_5p* (predicted) |
mirBase accession | None |
Sequence |
0- CCUAGUAGGUGUCCAGUAAGUG -22
Get sequence
|
Mature sequence |
Pab-Mir-325_3p (predicted) |
mirBase accession | None |
Sequence |
38- CUUAUUGAGGACCUCCUAUCAA -60
Get sequence
|