| MirGeneDB ID | Pab-Mir-325 |
|---|---|
| Family name | MIR-325 (all species) |
| Seed | UUAUUGA |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Cfa-Mir-325 Eca-Mir-325 Hsa-Mir-325 Laf-Mir-325 Mdo-Mir-325 Mml-Mir-325 Mmr-Mir-325 Mmu-Mir-325 Ocu-Mir-325 Rno-Mir-325 Sha-Mir-325 |
| Node of Origin (locus) | Theria |
| Node of Origin (family) | Theria |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054702.2: 81913495-81913554 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | AAGUCCACAGAACCAAUACAGUGCUUGGUUCCUAGUAGGUGUCCAGUAAGUGUUUGUGACGUAAUUUGCUUAUUGAGGACCUCCUAUCAAUCAAGCACUGUGCUAGGCUCUGGGACUACAGet precursor sequence |
| Structure | 10 20 30 40 50 AAGUCCACAGAACCAAU--| CC U G - UUUGUG ACAGUGCUUGGUU UAG AGGU UC CAGUAAGUG A UGUCACGAACUAA AUC UCCA GG GUUAUUCGU C ACAUCAGGGUCUCGGAUCG^ CU C - A UUAAUG . 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Star sequence | Pab-Mir-325_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- CCUAGUAGGUGUCCAGUAAGUG -22
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|
| Mature sequence | Pab-Mir-325_3p (predicted) |
| mirBase accession | None |
| Sequence |
38- CUUAUUGAGGACCUCCUAUCAA -60
Get sequence
|
