MirGeneDB 3.0

MirGeneDB ID

Pab-Mir-325

Family name MIR-325 (all species)
Seed UUAUUGA
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues
Orthologues Cfa-Mir-325  Eca-Mir-325  Hsa-Mir-325  Laf-Mir-325  Mdo-Mir-325  Mml-Mir-325  Mmr-Mir-325  Mmu-Mir-325  Ocu-Mir-325  Rno-Mir-325  Sha-Mir-325 
Node of Origin (locus) Theria
Node of Origin (family) Theria
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)
CM054702.2: 81913495-81913554 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAGUCCACAGAACCAAUACAGUGCUUGGUUCCUAGUAGGUGUCCAGUAAGUGUUUGUGACGUAAUUUGCUUAUUGAGGACCUCCUAUCAAUCAAGCACUGUGCUAGGCUCUGGGACUACA
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Structure
        10          20        30        40         50         
AAGUCCACAGAACCAAU--|            CC   U    G  -         UUUGUG 
                   ACAGUGCUUGGUU  UAG AGGU UC CAGUAAGUG      A
                   UGUCACGAACUAA  AUC UCCA GG GUUAUUCGU      C
ACAUCAGGGUCUCGGAUCG^            CU   C    -  A         UUAAUG 
.       110       100        90        80         70        60
Deep sequencing
3' NTU Unknown
MotifsNo
Tissue expression
 +
Br Br Li Li
Star sequence

Pab-Mir-325_5p* (predicted)

mirBase accessionNone
Sequence
0- CCUAGUAGGUGUCCAGUAAGUG -22
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Mature sequence

Pab-Mir-325_3p (predicted)

mirBase accessionNone
Sequence
38- CUUAUUGAGGACCUCCUAUCAA -60
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