MirGeneDB ID | Eca-Mir-769-P4 |
Family name |
MIR-769 (all species) |
Seed |
GAGACCU |
Species |
Horse (Equus caballus) |
MiRBase ID |
eca-mir-769a
|
Paralogues |
Eca-Mir-769-P5
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Orthologues |
Bta-Mir-769
Cfa-Mir-769
Cja-Mir-769
Cpo-Mir-769
Dno-Mir-769
Ete-Mir-769
Hsa-Mir-769
Mml-Mir-769
Mmr-Mir-769
Pab-Mir-769
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Node of Origin (locus) |
E. caballus
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Node of Origin (family) |
Eutheria
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Genome context (GCA_002863925.1_EquCab3.0) |
CM009157.1: 16822616-16822676 [-]
UCSC
Ensembl
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Precursor (pre-Mir +30nt flank) |
CGACUUGGUGCUGAUUUCUGCCCUCUGCCCGGAGACCUCUGGGUUCUGAGCUGUGACGUGGCUUCGGAGCUGGGAUCUCGGGGGUCUUGGUUCAGGGUUUGGGUCUCUGGGUUCUGGGCAC
Get precursor sequence
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Structure | 10 20 30 40 50
CGACUUGGUGCUGAUUUCU----| CU CG U G GUGACGU
GCCCU GCC GAGACCUCUGGG UCU AGCU \
UGGGA UGG UUCUGGGGGCUC AGG UCGA G
CACGGGUCUUGGGUCUCUGGGUU^ CU -- U G GGCUUCG
. 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
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3' NTU |
Unknown
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Motifs | UGUG in loop |
Tissue expression
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Ps |
Bo |
Ca |
Em |
En |
En |
En |
En |
En |
En |
En |
Gl |
He |
He |
Ho |
Im |
Ki |
Li |
Lo |
Lu |
Ma |
Ma |
Mi |
Pl |
Sp |
Te |
Tr |
Ut |
Ut |
Yo |
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Mature sequence |
Eca-Mir-769-P4_5p (predicted) |
mirBase accession | MIMAT0013015 |
Sequence |
0- GGAGACCUCUGGGUUCUGAGCU -22
Get sequence
|
Star sequence |
Eca-Mir-769-P4_3p* (predicted) |
mirBase accession | MIMAT0013016 |
Sequence |
39- CUGGGAUCUCGGGGGUCUUGGU -61
Get sequence
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