MirGeneDB 3.0

MirGeneDB ID

Eca-Mir-769-P4

Family name MIR-769 (all species)
Seed GAGACCU
Species Horse (Equus caballus)
MiRBase ID eca-mir-769a
Paralogues Eca-Mir-769-P5 
Orthologues Bta-Mir-769  Cfa-Mir-769  Cja-Mir-769  Cpo-Mir-769  Dno-Mir-769  Ete-Mir-769  Hsa-Mir-769  Mml-Mir-769  Mmr-Mir-769  Pab-Mir-769 
Node of Origin (locus) E. caballus
Node of Origin (family) Eutheria
Genome context
(GCA_002863925.1_EquCab3.0)
CM009157.1: 16822616-16822676 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CGACUUGGUGCUGAUUUCUGCCCUCUGCCCGGAGACCUCUGGGUUCUGAGCUGUGACGUGGCUUCGGAGCUGGGAUCUCGGGGGUCUUGGUUCAGGGUUUGGGUCUCUGGGUUCUGGGCAC
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Structure
        10            20        30        40        50          
CGACUUGGUGCUGAUUUCU----|    CU   CG            U   G    GUGACGU 
                       GCCCU  GCC  GAGACCUCUGGG UCU AGCU       \
                       UGGGA  UGG  UUCUGGGGGCUC AGG UCGA       G
CACGGGUCUUGGGUCUCUGGGUU^    CU   --            U   G    GGCUUCG 
 .       110       100        90          80        70
Deep sequencing
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3' NTU Unknown
MotifsUGUG in loop
Tissue expression
 +
Ps Bo Ca Em En En En En En En En Gl He He Ho Im Ki Li Lo Lu Ma Ma Mi Pl Sp Te Tr Ut Ut Yo
Mature sequence

Eca-Mir-769-P4_5p (predicted)

mirBase accessionMIMAT0013015
Sequence
0- GGAGACCUCUGGGUUCUGAGCU -22
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Star sequence

Eca-Mir-769-P4_3p* (predicted)

mirBase accessionMIMAT0013016
Sequence
39- CUGGGAUCUCGGGGGUCUUGGU -61
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