MirGeneDB 3.0

MirGeneDB ID

Eca-Mir-769-P5

Family name MIR-769 (all species)
Seed GAAACCU
Species Horse (Equus caballus)
MiRBase ID eca-mir-769b
Paralogues Eca-Mir-769-P4 
Orthologues Bta-Mir-769  Cfa-Mir-769  Cja-Mir-769  Cpo-Mir-769  Dno-Mir-769  Ete-Mir-769  Hsa-Mir-769  Mml-Mir-769  Mmr-Mir-769  Pab-Mir-769 
Node of Origin (locus) E. caballus
Node of Origin (family) Eutheria
Genome context
(GCA_002863925.1_EquCab3.0)
CM009157.1: 16638863-16638923 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CGACUUGGUGCUGAUUUCUGCCCUCUGCCCGGAAACCUCUGGGUUCUGAGCUGUGACGUGGCUUCUGAGCUGGGAUCUCGGGGGUCUUGGUUCAGGGUUUGGGUCUCUGGGUUCUGGGCAC
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Structure
        10            20        30        40        50          
CGACUUGGUGCUGAUUUCU----|    CU   C   AA        U   G    GUGACGU 
                       GCCCU  GCC GGA  CCUCUGGG UCU AGCU       \
                       UGGGA  UGG UCU  GGGGGCUC AGG UCGA       G
CACGGGUCUUGGGUCUCUGGGUU^    CU   U   --        U   G    GUCUUCG 
 .       110       100        90          80        70
Deep sequencing
3' NTU Unknown
MotifsUGUG in loop
Tissue expression
 +
Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er
Mature sequence

Eca-Mir-769-P5_5p (predicted)

mirBase accessionMIMAT0013017
Sequence
0- GGAAACCUCUGGGUUCUGAGCU -22
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Star sequence

Eca-Mir-769-P5_3p* (predicted)

mirBase accessionNone
Sequence
39- CUGGGAUCUCGGGGGUCUUGGU -61
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