| MirGeneDB ID | Pab-Mir-769 |
|---|---|
| Family name | MIR-769 (all species) |
| Seed | GAGACCU |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-769 Cfa-Mir-769 Cja-Mir-769 Cpo-Mir-769 Dno-Mir-769 Eca-Mir-769-P4 Eca-Mir-769-P5 Ete-Mir-769 Hsa-Mir-769 Laf-Mir-769-P1 Laf-Mir-769-P2 Laf-Mir-769-P3 Mml-Mir-769 Mmr-Mir-769 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054699.2: 52079482-52079542 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CGCCUUGGUGCUGAUUCCUGGGCUCUGACCUGAGACCUCUGGGUUCUGAGCUGUGAUGUUGCUCUCGAGCUGGGAUCUCCGGGGUCUUGGUUCAGGGCCGGGGCCUCUGGGUUCCAAGCACGet precursor sequence |
| Structure | 10 20 30 40 50 CGCCUUGGUGCUGAUUC--| G C UG U U G GUGAUGU CU GGCUCUGA C AGACCUC GGG UCU AGCU \ GG CCGGGACU G UCUGGGG CUC AGG UCGA U CACGAACCUUGGGUCUCCG^ G U GU C U G GCUCUCG . 110 100 90 80 70 |
| Deep sequencing | |
| Comment | Although the 3' terminal uridine is templated the DcRNA reads in human suggest that this is a Group 2 miRNA. |
| 3' NTU | Yes |
| Motifs | UGUG in loop |
| Mature sequence | Pab-Mir-769_5p |
| mirBase accession | None |
| Sequence |
0- UGAGACCUCUGGGUUCUGAGCU -22
Get sequence
|
| Star sequence | Pab-Mir-769_3p* |
| mirBase accession | None |
| Sequence |
39- CUGGGAUCUCCGGGGUCUUGGU -61
Get sequence
|
