MirGeneDB 3.0
MirGeneDB ID

Efe-Let-7-P10

Family name LET-7 (all species)
Seed GAGGUAG
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Let-7-P11  Efe-Let-7-P12  Efe-Let-7-P13  Efe-Let-7-P14 
Orthologues Aae-Let-7  Aga-Let-7  Agr-Let-7  Bge-Let-7  Bko-Let-7  Bpl-Let-7  Cte-Let-7  Dan-Let-7  Dlo-Let-7  Dma-Let-7  Dme-Let-7  Dmo-Let-7  Dpu-Let-7  Dsi-Let-7  Dya-Let-7  Eba-Let-7  Egr-Let-7  Esc-Let-7  Gpa-Let-7  Gsa-Let-7  Gsp-Let-7  Hme-Let-7  Hmi-Let-7  Hru-Let-7  Isc-Let-7  Lan-Let-7  Lgi-Let-7  Lhy-Let-7  Llo-Let-7  Mgi-Let-7  Mom-Let-7  Npo-Let-7  Obi-Let-7  Ofu-Let-7  Ovu-Let-7  Pau-Let-7  Pca-Let-7  Pcr-Let-7  Pdu-Let-7  Pfl-Let-7  Ple-Let-7  Pmi-Let-7  Pve-Let-7  Rph-Let-7  Sko-Let-7  Sma-Let-7  Sne-Let-7  Snu-Let-7  Spu-Let-7  Sro-Let-7  Tca-Let-7  Tur-Let-7  War-Let-7  Xbo-Let-7 
Node of Origin (locus) E. fetida
Node of Origin (family) Bilateria
Genome context
(Efe_combined)		 Efet.01.122508: 4741-4806 [-]
Precursor
(pre-Mir +30nt flank)
CGGUGGGUUGAAGACGGGUGGACUUCUGGCUGAGGUAGUAGGUUGUAUAGUAGGGUUACAUCAAUUCAGGCGACUAUACAACCUUCUAGCUUUGACUGGCGGUCUACAAGAGACACCCUUCUCAGC
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Structure
        10          20        30         40        50        60  
CGGUGGGUUGAAGACGG--       U UG CU-|  G   U            AGGGUUACAU 
                   GUGGACU C  G   GAG UAG AGGUUGUAUAGU          \
                   CAUCUGG G  C   UUC AUC UCCAACAUAUCA          C
CGACUCUUCCCACAGAGAA       C GU AGU^  G   U            GCGGACUUAA 
    120       110       100        90        80        70
Deep sequencing
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CommentThere is a second Dicer cut -1 on both arms.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Efe-Let-7-P10_5p
mirBase accessionNone
Sequence 
0- UGAGGUAGUAGGUUGUAUAGUA -22
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Star sequence

Efe-Let-7-P10_3p*
mirBase accessionNone
Sequence 
43- CUAUACAACCUUCUAGCUUUGAC -66
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