MirGeneDB 3.0
MirGeneDB ID

Efe-Let-7-P12

Family name LET-7 (all species)
Seed GAGGUAG
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Let-7-P10  Efe-Let-7-P11  Efe-Let-7-P13  Efe-Let-7-P14 
Orthologues Aae-Let-7  Aga-Let-7  Agr-Let-7  Bge-Let-7  Bko-Let-7  Bpl-Let-7  Cte-Let-7  Dan-Let-7  Dlo-Let-7  Dma-Let-7  Dme-Let-7  Dmo-Let-7  Dpu-Let-7  Dsi-Let-7  Dya-Let-7  Eba-Let-7  Egr-Let-7  Esc-Let-7  Gpa-Let-7  Gsa-Let-7  Gsp-Let-7  Hme-Let-7  Hmi-Let-7  Hru-Let-7  Isc-Let-7  Lan-Let-7  Lgi-Let-7  Lhy-Let-7  Llo-Let-7  Mgi-Let-7  Mom-Let-7  Npo-Let-7  Obi-Let-7  Ofu-Let-7  Ovu-Let-7  Pau-Let-7  Pca-Let-7  Pcr-Let-7  Pdu-Let-7  Pfl-Let-7  Ple-Let-7  Pmi-Let-7  Pve-Let-7  Rph-Let-7  Sko-Let-7  Sma-Let-7  Sne-Let-7  Snu-Let-7  Spu-Let-7  Sro-Let-7  Tca-Let-7  Tur-Let-7  War-Let-7  Xbo-Let-7 
Node of Origin (locus) E. fetida
Node of Origin (family) Bilateria
Genome context
(Efe_combined)		 Efet.01.442344: 153-221 [-]
Precursor
(pre-Mir +30nt flank)
GGGAAGCGCUGAAGUGCUGCGCGUUCCGGAUGAGGUAGUAGGUUGUAUAGGAUUUUAGAGAGUGCCAUAGCAACUACUAUACAACCUUCUAACUUGUCAGGAAGCGUAUUAAAAUAUCGACAAAAUACG
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Structure
        10            20        30        40        50        60   
GGGAAGCGCUGAAGUGC----|    G    G  UG  G   U           GAUUUUAGAGAG 
                     UGCGC UUCC GA  AG UAG AGGUUGUAUAG            U
                     AUGCG AAGG CU  UC AUC UCCAACAUAUC            G
GCAUAAAACAGCUAUAAAAUU^    -    A  GU  A   U           AUCAACGAUACC 
       120       110        100        90        80        70
Deep sequencing
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CommentThere is a second Dicer cut -1 on both arms.
3' NTU Unknown
MotifsNo
Tissue expression
-   +
To
Mature sequence

Efe-Let-7-P12_5p
mirBase accessionNone
Sequence 
0- UGAGGUAGUAGGUUGUAUAGGA -22
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Star sequence

Efe-Let-7-P12_3p* (predicted)
mirBase accessionNone
Sequence 
46- CUAUACAACCUUCUAACUUGUCA -69
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