MirGeneDB 3.0
MirGeneDB ID

Efe-Mir-281-P5

Family name MIR-281 (all species)
Seed GUCAUGG
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-281-P6  Efe-Mir-281-P7 
Orthologues Aae-Mir-281  Aga-Mir-281  Agr-Mir-281  Asu-Mir-281  Bfl-Mir-281  Bge-Mir-281  Bko-Mir-281  Bla-Mir-281  Bpl-Mir-281  Cin-Mir-281  Csc-Mir-281  Cte-Mir-281  Dgr-Mir-281  Dlo-Mir-281  Dma-Mir-281  Dpu-Mir-281  Eba-Mir-281  Ebu-Mir-281  Egr-Mir-281  Esc-Mir-281  Gsa-Mir-281  Hme-Mir-281  Hru-Mir-281  Isc-Mir-281  Lhy-Mir-281  Llo-Mir-281  Mgi-Mir-281  Mom-Mir-281  Npo-Mir-281  Obi-Mir-281  Ofu-Mir-281  Ovu-Mir-281  Pca-Mir-281  Pcr-Mir-281  Pdu-Mir-281  Pfl-Mir-281  Rph-Mir-281  Sko-Mir-281  Sma-Mir-281  Sme-Mir-281  Snu-Mir-281  Sto-Mir-281  Tca-Mir-281  Tur-Mir-281  War-Mir-281 
Node of Origin (locus) E. fetida
Node of Origin (family) Nephrozoa
Genome context
(Efe_combined)		 Efet.01.315753: 639-701 [-]
Precursor
(pre-Mir +30nt flank)
AAGCGAUGACGUAGUCGUCUGUCUUUGAUAAGGGGAGAACUCUUGCAUGACUGGCGUUUCUUUCAUAGGUCUGUCAUGGAGUUGCUCUCUUUAUUGGCAGCACGAAAGAUUCUUCACGACAUA
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Structure
        10          20        30         40        50        60  
AAGCGAUGACGUAGUCG-  -   CU UG          -|    UUG      U  CGUUUCU 
                  UC UGU  U  AUAAGGGGAG AACUC   CAUGAC GG       \
                  AG ACG  G  UAUUUCUCUC UUGAG   GUACUG CU       U
AUACAGCACUUCUUAGAA  C   AC GU          G^    ---      U  GGAUACU 
 120       110       100        90        80           70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
To
Star sequence

Efe-Mir-281-P5_5p*
mirBase accessionNone
Sequence 
0- AGGGGAGAACUCUUGCAUGACUGG -24
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Mature sequence

Efe-Mir-281-P5_3p
mirBase accessionNone
Sequence 
41- UGUCAUGGAGUUGCUCUCUUUA -63
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