Mir-210-P15-v2

MirGeneDB ID

Esc-Mir-210-P15-v2

Family name

MIR-210 (all species)

Seed

UGUGCGU

Species

Hawaiian bobtail squid (Euprymna scolopes)

MiRBase ID

Paralogues

Esc-Mir-210-P15-v1 Esc-Mir-210-P16

Orthologues

Aca-Mir-210 Agr-Mir-210 Ami-Mir-210 Bfl-Mir-210 Bla-Mir-210 Bta-Mir-210 Cfa-Mir-210 Cja-Mir-210 Cli-Mir-210 Cmi-Mir-210 Cpi-Mir-210 Cpo-Mir-210 Dgr-Mir-210 Dma-Mir-210 Dno-Mir-210 Dpu-Mir-210 Dre-Mir-210 Eba-Mir-210 Ebu-Mir-210 Eca-Mir-210 Egr-Mir-210 Ete-Mir-210 Gga-Mir-210 Gja-Mir-210 Gmo-Mir-210 Hsa-Mir-210 Isc-Mir-210 Lan-Mir-210 Lch-Mir-210 Lgi-Mir-210 Lhy-Mir-210 Llo-Mir-210 Loc-Mir-210 Mal-Mir-210 Mdo-Mir-210 Mgi-Mir-210 Mml-Mir-210 Mmr-Mir-210 Mmu-Mir-210 Mom-Mir-210 Mun-Mir-210 Neu-Mir-210 Npo-Mir-210 Oan-Mir-210 Obi-Mir-210-P15-v1 Obi-Mir-210-P15-v2 Ocu-Mir-210 Ofu-Mir-210 Ovu-Mir-210-P15-v1 Ovu-Mir-210-P15-v2 Pab-Mir-210 Pau-Mir-210 Pbv-Mir-210 Pca-Mir-210 Pma-Mir-210 Rno-Mir-210 Sha-Mir-210 Sko-Mir-210 Sma-Mir-210 Snu-Mir-210 Spt-Mir-210 Tgu-Mir-210 Tni-Mir-210 War-Mir-210 Xtr-Mir-210

Node of Origin (locus)

Coleoidea

Node of Origin (family)

Bilateria

Genome context
(GCA_004765925.1_miRNA_LOCI)

Esc-Mir-210-v1_pre_SRIE01019669.1:77355-77609: 100-156 [+] Ensembl

Precursor
(pre-Mir +30nt flank)

CUAAGGGAGACCACUCUGUGUCUUAUGUUCGUCGCUGUCGCACGUUACUAGGAAACUCAUGGAUUCUUGUGCGUGUGACAGUGACUAUGCAUGGACAUUACAUACAACGUCCGGCGA

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Structure

        10          20        30         40        50        
CUAAGGGAGACCACUCU--|     U    UC-               U  U    AACU 
                   GUGUCU AUGU   GUCGCUGUCGCACGU AC AGGA    C
                   UACAGG UACG   CAGUGACAGUGUGCG UG UCUU    A
AGCGGCCUGCAACAUACAU^     -    UAU               -  U    AGGU 
     110       100         90        80         70        60

Deep sequencing

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3' NTU

Motifs

UG at 5p(-14), CNNC at 3p(+17)

Tissue expression

Li

Star sequence

Esc-Mir-210-P15-v2_5p*

mirBase accession

None

Sequence

0- GUCGCUGUCGCACGUUACUAGGA -23

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Mature sequence

Esc-Mir-210-P15-v2_3p

mirBase accession

None

Sequence

36- UUGUGCGUGUGACAGUGACUA -57

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