MirGeneDB 3.0
MirGeneDB ID

Esc-Mir-210-P16

Family name MIR-210 (all species)
Seed UGUGCGU
Species Hawaiian bobtail squid (Euprymna scolopes)
MiRBase ID
Paralogues Esc-Mir-210-P15-v1  Esc-Mir-210-P15-v2 
Orthologues Aca-Mir-210  Agr-Mir-210  Ami-Mir-210  Bfl-Mir-210  Bla-Mir-210  Bta-Mir-210  Cfa-Mir-210  Cja-Mir-210  Cli-Mir-210  Cmi-Mir-210  Cpi-Mir-210  Cpo-Mir-210  Dgr-Mir-210  Dma-Mir-210  Dno-Mir-210  Dpu-Mir-210  Dre-Mir-210  Eba-Mir-210  Ebu-Mir-210  Eca-Mir-210  Egr-Mir-210  Ete-Mir-210  Gga-Mir-210  Gja-Mir-210  Gmo-Mir-210  Hsa-Mir-210  Isc-Mir-210  Lan-Mir-210  Lch-Mir-210  Lgi-Mir-210  Lhy-Mir-210  Llo-Mir-210  Loc-Mir-210  Mal-Mir-210  Mdo-Mir-210  Mgi-Mir-210  Mml-Mir-210  Mmr-Mir-210  Mmu-Mir-210  Mom-Mir-210  Mun-Mir-210  Neu-Mir-210  Npo-Mir-210  Oan-Mir-210  Obi-Mir-210-P16  Ocu-Mir-210  Ofu-Mir-210  Ovu-Mir-210-P16  Pab-Mir-210  Pau-Mir-210  Pbv-Mir-210  Pca-Mir-210  Pma-Mir-210  Rno-Mir-210  Sha-Mir-210  Sko-Mir-210  Sma-Mir-210  Snu-Mir-210  Spt-Mir-210  Tgu-Mir-210  Tni-Mir-210  War-Mir-210  Xtr-Mir-210 
Node of Origin (locus) Coleoidea
Node of Origin (family) Bilateria
Genome context
(GCA_004765925.1_miRNA_LOCI)		 Esc-Novel-54_pre_SRIE01047651.1:626439-626581: 43-101 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CGAAACGGUCUUUCUUUGGUGUCCACGCCUGUCUCUGUCCUCCGUACUAACAUGUGCUAUAUACUGUGUUGUGCGUGAGACAGCGACCGACGGGGAUUACCGCUCUCAACAUAGACGAU
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Structure
        10         20         30        40         50         
CGAAACGGUCUUUCUUU-   -|   A  CCU   U     C  -     U    UGUGCU 
                  GGU GUCC CG   GUC CUGUC UC CGUAC AACA      A
                  CCA UAGG GC   CAG GACAG AG GCGUG UUGU      U
UAGCAGAUACAACUCUCG   U^   G  AGC   C     -  U     -    GUCAUA 
       110       100        90        80          70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Li
Star sequence

Esc-Mir-210-P16_5p*
mirBase accessionNone
Sequence 
0- GUCUCUGUCCUCCGUACUAACA -22
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Mature sequence

Esc-Mir-210-P16_3p
mirBase accessionNone
Sequence 
38- UUGUGCGUGAGACAGCGACCG -59
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