MirGeneDB ID | Ovu-Mir-210-P16 |
Family name |
MIR-210 (all species) |
Seed |
UGUGCGU |
Species |
Common octopus (Octopus vulgaris) |
MiRBase ID |
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Paralogues |
Ovu-Mir-210-P15-v1
Ovu-Mir-210-P15-v2
|
Orthologues |
Aca-Mir-210
Agr-Mir-210
Ami-Mir-210
Bfl-Mir-210
Bla-Mir-210
Bta-Mir-210
Cfa-Mir-210
Cja-Mir-210
Cli-Mir-210
Cmi-Mir-210
Cpi-Mir-210
Cpo-Mir-210
Dgr-Mir-210
Dma-Mir-210
Dno-Mir-210
Dpu-Mir-210
Dre-Mir-210
Eba-Mir-210
Ebu-Mir-210
Eca-Mir-210
Egr-Mir-210
Esc-Mir-210-P16
Ete-Mir-210
Gga-Mir-210
Gja-Mir-210
Gmo-Mir-210
Hsa-Mir-210
Isc-Mir-210
Lan-Mir-210
Lch-Mir-210
Lgi-Mir-210
Lhy-Mir-210
Llo-Mir-210
Loc-Mir-210
Mal-Mir-210
Mdo-Mir-210
Mgi-Mir-210
Mml-Mir-210
Mmr-Mir-210
Mmu-Mir-210
Mom-Mir-210
Mun-Mir-210
Neu-Mir-210
Npo-Mir-210
Oan-Mir-210
Obi-Mir-210-P16
Ocu-Mir-210
Ofu-Mir-210
Pab-Mir-210
Pau-Mir-210
Pbv-Mir-210
Pca-Mir-210
Pma-Mir-210
Rno-Mir-210
Sha-Mir-210
Sko-Mir-210
Sma-Mir-210
Snu-Mir-210
Spt-Mir-210
Tgu-Mir-210
Tni-Mir-210
War-Mir-210
Xtr-Mir-210
|
Node of Origin (locus) |
Coleoidea
|
Node of Origin (family) |
Bilateria
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Genome context (GCA_003957725.1_ASM395772v1_OVU) |
RXHP01063274.1: 467-524 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
AUGAUGAUGAUACCGCUGGUGGCUGCUGCUGUCACUGUCCUCCGUACUAACAUUUCUUUAAACAGUGUUGUGCGUGAGACAGCGACCGGAGAAGCUAACCACAUUCGCCAAAUCAUCA
Get precursor sequence
|
Structure | 10 20 30 40 50
AUGAUGAUGAUACCGCU- -| G G - A C - U UUUCUU
GG UGGCU CU CUG UC CUGUC UC CGUAC AACA \
CC AUCGA GA GGC AG GACAG AG GCGUG UUGU U
ACUACUAAACCGCUUACA A^ A - C C - U - GACAAA
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | UG at 5p(-14), CNNC at 3p(+17) |
Tissue expression
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Ax |
Ce |
Fr |
He |
In |
Op |
Op |
Pe |
Po |
Re |
Sk |
St |
Su |
Su |
Te |
Ve |
Vi |
Wh |
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Star sequence |
Ovu-Mir-210-P16_5p* |
mirBase accession | None |
Sequence |
0- GUCACUGUCCUCCGUACUAACA -22
Get sequence
|
Mature sequence |
Ovu-Mir-210-P16_3p |
mirBase accession | None |
Sequence |
37- UUGUGCGUGAGACAGCGACCG -58
Get sequence
|