MirGeneDB ID | Ete-Mir-423 |
Family name |
MIR-423 (all species) |
Seed |
GAGGGGC |
Species |
Lesser hedgehog tenrec (Echinops telfairi) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Bta-Mir-423
Cfa-Mir-423
Cja-Mir-423
Cpo-Mir-423
Dno-Mir-423
Eca-Mir-423
Hsa-Mir-423
Laf-Mir-423
Mml-Mir-423
Mmr-Mir-423
Mmu-Mir-423
Ocu-Mir-423
Pab-Mir-423
Rno-Mir-423
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (echTel2) |
JH980319: 3587465-3587523 [-]
UCSC
|
Precursor (pre-Mir +30nt flank) |
AAACUUGCGAGGAGAUACAGGAAGUUAGGCUGAGGGGCAGAGAGCGAGACUUUUCUGUUUUCCAAAAGCUCGGUCUGAGGCCCCUCAGUCUUGCUUCCUACUCGGCGCUUGCGUUCCUC
Get precursor sequence
|
Structure | 10 20 30 40 50
AAACUUGCGAGGAGAUAC-- U AG-| G A UCUGU
AGGAAGU AGGCUGAGGGGC AGA CGAG CUUU \
UCCUUCG UCUGACUCCCCG UCU GCUC GAAA U
CUCCUUGCGUUCGCGGCUCA U GAG^ G - ACCUU
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Mature sequence |
Ete-Mir-423_5p |
mirBase accession | None |
Sequence |
0- UGAGGGGCAGAGAGCGAGACUUU -23
Get sequence
|
Co-mature sequence |
Ete-Mir-423_3p |
mirBase accession | None |
Sequence |
36- AGCUCGGUCUGAGGCCCCUCAGU -59
Get sequence
|