| MirGeneDB ID | Pab-Mir-423 |
|---|---|
| Family name | MIR-423 (all species) |
| Seed | GAGGGGC |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-423 Cfa-Mir-423 Cja-Mir-423 Cpo-Mir-423 Dno-Mir-423 Eca-Mir-423 Ete-Mir-423 Hsa-Mir-423 Laf-Mir-423 Mml-Mir-423 Mmr-Mir-423 Mmu-Mir-423 Ocu-Mir-423 Rno-Mir-423 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054698.2: 44228003-44228061 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | AAACUUGUGAGGAAAUAGAGGAAGUUAGGCUGAGGGGCAGAGAGCGAGACUUUUCUAUUUUCCAAAAGCUCGGUCUGAGGCCCCUCAGUCUUGCUUCCUACCCCGCGCUUGAGUUUCUCGet precursor sequence |
| Structure | 10 20 30 40 50 AAACUUGUGAGGAAAUAG-- U AG-| G A UCUAU AGGAAGU AGGCUGAGGGGC AGA CGAG CUUU \ UCCUUCG UCUGACUCCCCG UCU GCUC GAAA U CUCUUUGAGUUCGCGCCCCA U GAG^ G - ACCUU 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | No |
| Mature sequence | Pab-Mir-423_5p |
| mirBase accession | None |
| Sequence |
0- UGAGGGGCAGAGAGCGAGACUUU -23
Get sequence
|
| Star sequence | Pab-Mir-423_3p* |
| mirBase accession | None |
| Sequence |
36- AGCUCGGUCUGAGGCCCCUCAGU -59
Get sequence
|
