MirGeneDB 3.0
MirGeneDB ID

Gja-Mir-129-P4

Family name MIR-129 (all species)
Seed UUUUUGC
Species Schlegels Japanese gecko (Gekko japonicus)
MiRBase ID
Paralogues Gja-Mir-129-P1  Gja-Mir-129-P2 
Orthologues Aca-Mir-129-P4  Ami-Mir-129-P4  Cmi-Mir-129-P4  Lch-Mir-129-P4  Mun-Mir-129-P4  Pbv-Mir-129-P4  Spt-Mir-129-P4  Sto-Mir-129-P4  Xla-Mir-129-P4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Chordata
Genome context
(GCF_001447785.1_Gekko_japonicus)		 NW_015168079.1: 600525-600593 [+]
Precursor
(pre-Mir +30nt flank)
GAGAGGAGAUGAGACGGGUCUUCCCUGGGUCUUUUUGCGGUCUGGGCUUUCUGGGUCUGUCCAACCCCCGUAUCAGAAAGCCCUUACCCCAAAAAGCAUCCGGGGUUGGACGAUGGCAUCGCUGGAACG
Get precursor sequence
Structure
        10         20         30         40        50        60   
GAGAGGAGAUGAGACGG-    U-        -|      C   CU        UGGGUCUGUCC 
                  GUCU  CCCUGGGU CUUUUUG GGU  GGGCUUUC           A
                  CAGG  GGGGCCUA GAAAAAC CCA  CCCGAAAG           A
GCAAGGUCGCUACGGUAG    UU        C^      C   UU        ACUAUGCCCCC 
       120       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Gja-Mir-129-P4_5p
mirBase accessionNone
Sequence 
0- CUUUUUGCGGUCUGGGCUUUC -21
Get sequence
Co-mature sequence

Gja-Mir-129-P4_3p
mirBase accessionNone
Sequence 
47- AAGCCCUUACCCCAAAAAGCAU -69
Get sequence