| MirGeneDB ID | Lch-Mir-129-P4 |
|---|---|
| Family name | MIR-129 (all species) |
| Seed | UUUUUGC |
| Species | Coelacanth (Latimeria chalumnae) |
| MiRBase ID | |
| Paralogues | Lch-Mir-129-P1 Lch-Mir-129-P2 |
| Orthologues | Aca-Mir-129-P4 Ami-Mir-129-P4 Cmi-Mir-129-P4 Gja-Mir-129-P4 Mun-Mir-129-P4 Pbv-Mir-129-P4 Spt-Mir-129-P4 Sto-Mir-129-P4 Xla-Mir-129-P4 |
| Node of Origin (locus) | Gnathostomata |
| Node of Origin (family) | Chordata |
| Genome context (LatCha1_add) |
JH126644.1: 619207-619275 [+] Ensembl |
| Precursor (pre-Mir +30nt flank) | AAGAAAAGAAGAAAAAAGUCCCCCGCAGAUCUUUUUGCGGUCUGGGCUUUCUGGGUCUGUAACAGCACCAUUUCAGAAAGCCCUUACCCCAAAAAGCAUCUGCGGGUGGACACUGUCAACGUUGGAGAUGet precursor sequence |
| Structure | 10 20 30 40 50 60 AAGAAAAGAAGAAAAAA- - -| C CU UGGGUCUGUAA GUCC CCCGCAGAU CUUUUUG GGU GGGCUUUC C CAGG GGGCGUCUA GAAAAAC CCA CCCGAAAG A UAGAGGUUGCAACUGUCA U C^ C UU ACUUUACCACG 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Lch-Mir-129-P4_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- CUUUUUGCGGUCUGGGCUUUC -21
Get sequence
|
| Star sequence | Lch-Mir-129-P4_3p* (predicted) |
| mirBase accession | None |
| Sequence |
47- AAGCCCUUACCCCAAAAAGCAU -69
Get sequence
|
