| MirGeneDB ID | Pbv-Mir-129-P4 |
|---|
| Family name |
MIR-129 (all species) |
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| Seed |
UUUUUGC |
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| Species |
Burmese python (Python bivittatus) |
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| MiRBase ID |
pbv-mir-129b
|
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| Paralogues |
Pbv-Mir-129-P1
Pbv-Mir-129-P2
|
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| Orthologues |
Aca-Mir-129-P4
Ami-Mir-129-P4
Cmi-Mir-129-P4
Gja-Mir-129-P4
Lch-Mir-129-P4
Mun-Mir-129-P4
Spt-Mir-129-P4
Sto-Mir-129-P4
Xla-Mir-129-P4
|
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| Node of Origin (locus) |
Gnathostomata
|
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| Node of Origin (family) |
Chordata
|
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Genome context
(GCA_000186305.2_Python_molurus_bivittatus) |
KE953229.1: 75187-75254 [-]
|
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Precursor
(pre-Mir +30nt flank) |
AGAAGAAGCAAUGACAAGUCUUCUCUGGGUCUUUUUGCGGUCUGGGCUUUCUGGGUCUGUCCAACCCCGUAUCAGAAAGCCCUUACCCCAAAAAGCAUCCGGGGUUGUACGAUGGCAUCGCUGGAACC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
AGAAGAAGCAAUGACAA- CUU- -| C CU UGGGUCUGUCC
GU CUCUGGGU CUUUUUG GGU GGGCUUUC \
CA GGGGCCUA GAAAAAC CCA CCCGAAAG A
CCAAGGUCGCUACGGUAG UGUU C^ C UU ACUAUGCCCCA
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Pbv-Mir-129-P4_5p |
| mirBase accession | MIMAT0038924 |
|---|
| Sequence |
0- CUUUUUGCGGUCUGGGCUUUC -21
Get sequence
|
|---|
| Co-mature sequence |
Pbv-Mir-129-P4_3p |
| mirBase accession | MIMAT0038925 |
|---|
| Sequence |
46- AAGCCCUUACCCCAAAAAGCAU -68
Get sequence
|
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