MirGeneDB 2.1

MirGeneDB ID

Pbv-Mir-129-P4

Family name MIR-129 (all species)
Seed UUUUUGC
Species Burmese python (Python bivittatus)
MiRBase ID pbv-mir-129b
Paralogues Pbv-Mir-129-P1  Pbv-Mir-129-P2 
Orthologues Aca-Mir-129-P4  Ami-Mir-129-P4  Cmi-Mir-129-P4  Gja-Mir-129-P4  Lch-Mir-129-P4  Mun-Mir-129-P4  Spt-Mir-129-P4  Sto-Mir-129-P4  Xla-Mir-129-P4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Chordata
Genome context
(GCA_000186305.2_Python_molurus_bivittatus)
KE953229.1: 75187-75254 [-]
Precursor
(pre-Mir +30nt flank)
AGAAGAAGCAAUGACAAGUCUUCUCUGGGUCUUUUUGCGGUCUGGGCUUUCUGGGUCUGUCCAACCCCGUAUCAGAAAGCCCUUACCCCAAAAAGCAUCCGGGGUUGUACGAUGGCAUCGCUGGAACC
Get precursor sequence
Structure
        10         20         30         40        50        60   
AGAAGAAGCAAUGACAA-  CUU-        -|      C   CU        UGGGUCUGUCC 
                  GU    CUCUGGGU CUUUUUG GGU  GGGCUUUC           \
                  CA    GGGGCCUA GAAAAAC CCA  CCCGAAAG           A
CCAAGGUCGCUACGGUAG  UGUU        C^      C   UU        ACUAUGCCCCA 
      120       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Mature sequence

Pbv-Mir-129-P4_5p

mirBase accessionMIMAT0038924
Sequence
0- CUUUUUGCGGUCUGGGCUUUC -21
Get sequence
Co-mature sequence

Pbv-Mir-129-P4_3p

mirBase accessionMIMAT0038925
Sequence
46- AAGCCCUUACCCCAAAAAGCAU -68
Get sequence