| MirGeneDB ID | Gpa-Mir-306 |
|---|
| Family name |
MIR-306 (all species) |
|---|
| Seed |
CAGGUAC |
|---|
| Species |
Tsetse fly (Glossina pallidipes) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Aae-Mir-306
Aga-Mir-306
Bge-Mir-306
Dan-Mir-306
Dlo-Mir-306
Dme-Mir-306
Dmo-Mir-306
Dsi-Mir-306
Dya-Mir-306
Hme-Mir-306
|
|---|
| Node of Origin (locus) |
Neoptera
|
|---|
| Node of Origin (family) |
Neoptera
|
|---|
Genome context
(GpalI1) |
Scaffold60: 383833-383895 [-]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
UAAAAAAAGAAAAAAAAAGAACACAUUUGUACAGGUACUUAGUGACUCUCAAUGAUUGUAUUAAAUGGUUUGAGUGUCAUUCUGUACCUUCACGAAAGUUUUCUAAACGCAACAAAUCGAUAU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
UAAAAAAAGAAAAAAAA--| C A AC UU U UGAUUGUA
AGAA AC UUUGU AGGUAC AGUGAC CUCAA \
UCUU UG AAGCA UCCAUG UUACUG GAGUU U
UAUAGCUAAACAACGCAAA^ U A CU UC U UGGUAAAU
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
| Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|---|
| Mature sequence |
Gpa-Mir-306_5p |
| mirBase accession | None |
|---|
| Sequence |
0- ACAGGUACUUAGUGACUCUCAA -22
Get sequence
|
|---|
| Star sequence |
Gpa-Mir-306_3p* |
| mirBase accession | None |
|---|
| Sequence |
41- GAGUGUCAUUCUGUACCUUCAC -63
Get sequence
|
|---|
