| MirGeneDB ID | Laf-Mir-598 |
|---|---|
| Family name | MIR-598 (all species) |
| Seed | ACGUCAU |
| Species | African bush elephant (Loxodonta africana) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Cja-Mir-598 Cpo-Mir-598 Ete-Mir-598 Hsa-Mir-598 Mml-Mir-598 Mmr-Mir-598 Mmu-Mir-598 Pab-Mir-598 Rno-Mir-598-P1 Rno-Mir-598-P2 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_000001905.1_Loxafr3.0) |
GL010049.1: 2491075-2491132 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GAAGAUGGUUUGAUGAUACUGCUGAUGCUGGCGGUGAUGCCGAUGGUGGGAGCUGGAAAUAGGUGCUACGUCAUCGUUGUCAUCGUCAUCAUCAUCAUCUGAGCAACCACCCUGUAGCGet precursor sequence |
| Structure | 10 20 30 40 50 GAAGAUGGUUUGAUGAUAC--| C C GC GU GG UGGAA UG UGAUG UGGCGGUGAU CGAUG G AGC \ AC ACUAC ACUGCUACUG GCUAC C UCG A CGAUGUCCCACCAACGAGUCU^ U U UU UG A- UGGAU 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Laf-Mir-598_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- GCGGUGAUGCCGAUGGUGGGAGC -23
Get sequence
|
| Mature sequence | Laf-Mir-598_3p |
| mirBase accession | None |
| Sequence |
36- UACGUCAUCGUUGUCAUCGUCA -58
Get sequence
|
