MirGeneDB ID | Mmr-Mir-598 |
Family name |
MIR-598 (all species) |
Seed |
ACGUCAU |
Species |
Gray mouse lemur (Microcebus murinus) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Cja-Mir-598
Cpo-Mir-598
Ete-Mir-598
Hsa-Mir-598
Laf-Mir-598
Mml-Mir-598
Mmu-Mir-598
Pab-Mir-598
Rno-Mir-598-P1
Rno-Mir-598-P2
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (GCA_000165445.3_Mmur_3.0_genomic) |
CM007680.1: 14924810-14924868 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
GAGGAUGGCUUGACGAUGCUGCUGAUGCUGGCGGUGACACCGAUGGCGUGAGCUGGAGACAGGGUGCUACGUCAUCGUUGUCAUCGUCAUCAUCAUCACCCGAGCAGCCACCAGUGCGG
Get precursor sequence
|
Structure | 10 20 30 40 50
GAGGAUGGCUUGACGAUGC--| C C C G UGGAG
UG UGAUG UGGCGGUGACA CGAUGGCGU AGC A
AC ACUAC ACUGCUACUGU GCUACUGCA UCG C
GGCGUGACCACCGACGAGCCC^ U U U - UGGGA
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | UG at 5p(-14), CNNC at 3p(+17) |
Tissue expression
|
|
Star sequence |
Mmr-Mir-598_5p* |
mirBase accession | None |
Sequence |
0- GCGGUGACACCGAUGGCGUGAGC -23
Get sequence
|
Mature sequence |
Mmr-Mir-598_3p |
mirBase accession | None |
Sequence |
37- UACGUCAUCGUUGUCAUCGUCA -59
Get sequence
|