MirGeneDB 3.0
MirGeneDB ID

Lan-Mir-92-o79a

Family name MIR-92 (all species)
Seed AUUGCAC
Species Lingula (Lingula anatina)
MiRBase ID
Paralogues Lan-Mir-92-o79b  Lan-Mir-92-o80a  Lan-Mir-92-o80b  Lan-Mir-92-o81  Lan-Mir-92-o82  Lan-Mir-92-o83  Lan-Mir-92-o84  Lan-Mir-92-o85 
Orthologues Asu-Mir-92  Cel-Mir-92  Esc-Mir-92  Gsp-Mir-92  Hmi-Mir-92  Isc-Mir-92  Obi-Mir-92  Sme-Mir-92 
Node of Origin (locus) L. anatina
Node of Origin (family) Bilateria
Genome context
(LinAna_1.0)		 LFEI01000276: 121524-121583 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AUUUAAGUAAAAGAGUGUGUUGUACGUGACAGGCGGAACGAGAGCAACUUUGAUAACUUUUGUCCCCAAAUUGCACUCGUCCCGGCCUGCCGCGCUCGGCAUUCCGACGUCUAGCUGCAC
Get precursor sequence
Structure
        10          20        30         40        50         
AUUUAAGUAAAAGAGUG--     UA    A    -|  A     A    C    AUAACU 
                   UGUUG  CGUG CAGG CGG ACGAG GCAA UUUG      U
                   ACGGC  GCGC GUCC GCC UGCUC CGUU AAAC      U
CACGUCGAUCUGCAGCCUU     UC    C    G^  C     A    -    CCCUGU 
.       110       100        90        80         70        60
Deep sequencing
Go to detailed chart
CommentIt is not clear either from phylogenetic or syntenic information how many Mir-92 genes were present in the last common ancestor of bilaterians and how the vertebrate Mir-92s relate to the invertebrate Mir-92s and thus these multiple paralogues in invertebrates are classified here as orphans pending additional data.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To To
Star sequence

Lan-Mir-92-o79a_5p* (predicted)
mirBase accessionNone
Sequence 
0- AGGCGGAACGAGAGCAACUUUG -22
Get sequence
Mature sequence

Lan-Mir-92-o79a_3p
mirBase accessionNone
Sequence 
38- AAUUGCACUCGUCCCGGCCUGC -60
Get sequence