MirGeneDB 3.0
MirGeneDB ID

Lan-Mir-92-o80a

Family name MIR-92 (all species)
Seed AUUGCAC
Species Lingula (Lingula anatina)
MiRBase ID
Paralogues Lan-Mir-92-o79a  Lan-Mir-92-o79b  Lan-Mir-92-o80b  Lan-Mir-92-o81  Lan-Mir-92-o82  Lan-Mir-92-o83  Lan-Mir-92-o84  Lan-Mir-92-o85 
Orthologues Asu-Mir-92  Cel-Mir-92  Esc-Mir-92  Gsp-Mir-92  Hmi-Mir-92  Isc-Mir-92  Obi-Mir-92  Sme-Mir-92 
Node of Origin (locus) L. anatina
Node of Origin (family) Bilateria
Genome context
(LinAna_1.0)		 LFEI01000276: 122217-122275 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AAGAAAUGACGGAAUAACUCUAGGGCACGUAGGCAGUGAUGAGGGCAAUAUUGUGAAAGAAAUGGCAAAUUGCACUCGUCCCGGCCUGCUGGACCCUUAACAUACGGCACUCCUUGUGG
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Structure
        10        20          30        40        50         
AAGAAAUGACGGAAUAACUCU-    CA -|     AGU      G     A   UGAAA 
                      AGGG  C GUAGGC   GAUGAG GCAAU UUG     G
                      UCCC  G CGUCCG   CUGCUC CGUUA AAC     A
GGUGUUCCUCACGGCAUACAAU    AG U^     GCC      A     -   GGUAA 
       110       100        90        80        70         60
Deep sequencing
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CommentIt is not clear either from phylogenetic or syntenic information how many Mir-92 genes were present in the last common ancestor of bilaterians and how the vertebrate Mir-92s relate to the invertebrate Mir-92s and thus these multiple paralogues in invertebrates are classified here as orphans pending additional data.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
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Star sequence

Lan-Mir-92-o80a_5p*
mirBase accessionNone
Sequence 
0- AGGCAGUGAUGAGGGCAAUAUUG -23
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Mature sequence

Lan-Mir-92-o80a_3p
mirBase accessionNone
Sequence 
37- AAUUGCACUCGUCCCGGCCUGC -59
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