MirGeneDB 3.0
MirGeneDB ID

Lan-Mir-92-o84

Family name MIR-92 (all species)
Seed AUUGCAC
Species Lingula (Lingula anatina)
MiRBase ID
Paralogues Lan-Mir-92-o79a  Lan-Mir-92-o79b  Lan-Mir-92-o80a  Lan-Mir-92-o80b  Lan-Mir-92-o81  Lan-Mir-92-o82  Lan-Mir-92-o83  Lan-Mir-92-o85 
Orthologues Asu-Mir-92  Cel-Mir-92  Esc-Mir-92  Gsp-Mir-92  Hmi-Mir-92  Isc-Mir-92  Obi-Mir-92  Sme-Mir-92 
Node of Origin (locus) L. anatina
Node of Origin (family) Bilateria
Genome context
(LinAna_1.0)		 LFEI01000686: 142666-142724 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AGGCAGGAAAGUCCACUUACGUGUCAGUGGCGUCCGUGUGAUGUGCAACAUUGUUUUUUAAAAUUCAAAUUGCACAUCUCCCGGCCGGCAUUAGCAUGCCUCAAUCUGCAGAAUGUUCA
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Structure
        10          20        30        40        50         
AGGCAGGAAAGUCCACUUA--|   UC    G  U   UGU         CA   UUUUU 
                     CGUG  AGUG CG CCG   GAUGUGCAA  UUG     U
                     GUAC  UUAC GC GGC   CUACACGUU  AAC     A
ACUUGUAAGACGUCUAACUCC^   GA    G  C   CCU         A-   UUAAA 
       110       100        90        80        70         60
Deep sequencing
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CommentIt is not clear either from phylogenetic or syntenic information how many Mir-92 genes were present in the last common ancestor of bilaterians and how the vertebrate Mir-92s relate to the invertebrate Mir-92s and thus these multiple paralogues in invertebrates are classified here as orphans pending additional data.
3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
-   +
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Star sequence

Lan-Mir-92-o84_5p* (predicted)
mirBase accessionNone
Sequence 
0- CGUCCGUGUGAUGUGCAACAUUGU -24
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Mature sequence

Lan-Mir-92-o84_3p
mirBase accessionNone
Sequence 
37- AAUUGCACAUCUCCCGGCCGGC -59
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