MirGeneDB 3.0
MirGeneDB ID

Llo-Mir-190-P22

Family name MIR-190 (all species)
Seed GAUAUGU
Species Bootlace worm (Lineus longissimus)
MiRBase ID
Paralogues Llo-Mir-190-P23 
Orthologues Aae-Mir-190  Aga-Mir-190  Agr-Mir-190  Asu-Mir-190  Bfl-Mir-190  Bge-Mir-190  Bko-Mir-190  Bla-Mir-190  Bpl-Mir-190  Cbr-Mir-190  Cel-Mir-190  Cte-Mir-190  Dan-Mir-190  Dlo-Mir-190  Dma-Mir-190  Dme-Mir-190  Dmo-Mir-190  Dpu-Mir-190  Dsi-Mir-190  Dya-Mir-190  Eba-Mir-190  Egr-Mir-190  Esc-Mir-190  Gpa-Mir-190  Gsa-Mir-190  Hme-Mir-190  Hmi-Mir-190  Hru-Mir-190  Isc-Mir-190  Mgi-Mir-190  Mom-Mir-190  Npo-Mir-190  Obi-Mir-190  Ofu-Mir-190  Ovu-Mir-190  Pau-Mir-190  Pca-Mir-190  Pdu-Mir-190  Pfl-Mir-190  Pmi-Mir-190  Pve-Mir-190  Rph-Mir-190  Sko-Mir-190  Sma-Mir-190  Snu-Mir-190  Tca-Mir-190  Tur-Mir-190  War-Mir-190  Xbo-Mir-190 
Node of Origin (locus) Lineidae
Node of Origin (family) Bilateria
Genome context
(GCA_910592395.2_tnLinLong1)		 OU343005.1: 14856451-14856507 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CCAUCCCUCCAAGAUGUUCCCAUCCCUCCAAGAUAUGUUUGAUAUAAUUGGUGGUUCAUCAAUCCACCAUAUAUCCGACAUAUCAUGGAGUGGUGGGGGAAACGCCAGGUUCUAGUU
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Structure
        10          20        30        40        50         
CCAUCCCUCCAAGAUGU--|      C     A        U      AU      UUCA 
                   UCCCAUC CUCCA GAUAUGUU GAUAUA  UGGUGG    \
                   GGGGUGG GAGGU CUAUACAG CUAUAU  ACCACC    U
UUGAUCUUGGACCGCAAAG^      U     A        C      --      UAAC 
     110       100        90        80        70          60
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
No No No No No No
Mature sequence

Llo-Mir-190-P22_5p
mirBase accessionNone
Sequence 
0- AGAUAUGUUUGAUAUAAUUGGUGG -24
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Star sequence

Llo-Mir-190-P22_3p* (predicted)
mirBase accessionNone
Sequence 
35- ACCAUAUAUCCGACAUAUCAUG -57
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