MirGeneDB 3.0
MirGeneDB ID

Mml-Mir-154-P34

Family name MIR-154 (all species)
Seed AUAUUAU
Species Rhesus monkey (Macaca mulatta)
MiRBase ID mml-mir-656
Paralogues Mml-Mir-154-P1  Mml-Mir-154-P2-v1  Mml-Mir-154-P2-v2  Mml-Mir-154-P3-v1  Mml-Mir-154-P3-v2  Mml-Mir-154-P4  Mml-Mir-154-P5  Mml-Mir-154-P6a-v1  Mml-Mir-154-P6a-v2  Mml-Mir-154-P6b  Mml-Mir-154-P7  Mml-Mir-154-P8a  Mml-Mir-154-P8b  Mml-Mir-154-P9  Mml-Mir-154-P10  Mml-Mir-154-P11  Mml-Mir-154-P12  Mml-Mir-154-P14  Mml-Mir-154-P16a  Mml-Mir-154-P16b  Mml-Mir-154-P17  Mml-Mir-154-P18  Mml-Mir-154-P19  Mml-Mir-154-P20  Mml-Mir-154-P21  Mml-Mir-154-P23  Mml-Mir-154-P24  Mml-Mir-154-P25  Mml-Mir-154-P26  Mml-Mir-154-P28-v1  Mml-Mir-154-P28-v2  Mml-Mir-154-P29  Mml-Mir-154-P30  Mml-Mir-154-P31  Mml-Mir-154-P32  Mml-Mir-154-P33 
Orthologues Bta-Mir-154-P34  Cfa-Mir-154-P34  Cja-Mir-154-P34  Cpo-Mir-154-P34  Dno-Mir-154-P34  Eca-Mir-154-P34  Ete-Mir-154-P34  Hsa-Mir-154-P34  Laf-Mir-154-P34  Mmr-Mir-154-P34  Ocu-Mir-154-P34  Pab-Mir-154-P34 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_003339765.3_Mmul_10_traces)		 CM014342.1: 163286843-163286898 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-154-P34)		 Mir-154-P1 CM014342.1: 163243569-163243627 [+] UCSC Ensembl
Mir-154-P2-v2 CM014342.1: 163244837-163244894 [+] UCSC Ensembl
Mir-154-P2-v1 CM014342.1: 163244838-163244893 [+] UCSC Ensembl
Mir-154-P3-v1 CM014342.1: 163245294-163245348 [+] UCSC Ensembl
Mir-154-P3-v2 CM014342.1: 163245295-163245347 [+] UCSC Ensembl
Mir-154-P4 CM014342.1: 163246515-163246571 [+] UCSC Ensembl
Mir-154-P6a-v2 CM014342.1: 163247243-163247298 [+] UCSC Ensembl
Mir-154-P6a-v1 CM014342.1: 163247243-163247298 [+] UCSC Ensembl
Mir-154-P7 CM014342.1: 163247536-163247593 [+] UCSC Ensembl
Mir-154-P8a CM014342.1: 163248299-163248356 [+] UCSC Ensembl
Mir-154-P8b CM014342.1: 163248615-163248673 [+] UCSC Ensembl
Mir-154-P9 CM014342.1: 163250281-163250336 [+] UCSC Ensembl
Mir-154-P11 CM014342.1: 163252625-163252682 [+] UCSC Ensembl
Mir-154-P12 CM014342.1: 163254476-163254533 [+] UCSC Ensembl
Mir-376-P2 CM014342.1: 163259895-163259952 [+] UCSC Ensembl
Mir-376-P3 CM014342.1: 163260280-163260337 [+] UCSC Ensembl
Mir-154-P14 CM014342.1: 163260433-163260488 [+] UCSC Ensembl
Mir-376-P4 CM014342.1: 163260659-163260716 [+] UCSC Ensembl
Mir-376-P5 CM014342.1: 163260987-163261044 [+] UCSC Ensembl
Mir-154-P16a CM014342.1: 163263188-163263247 [+] UCSC Ensembl
Mir-154-P16b CM014342.1: 163264408-163264467 [+] UCSC Ensembl
Mir-154-P17 CM014342.1: 163266126-163266188 [+] UCSC Ensembl
Mir-154-P18 CM014342.1: 163266668-163266725 [+] UCSC Ensembl
Mir-154-P19 CM014342.1: 163267518-163267581 [+] UCSC Ensembl
Mir-154-P20 CM014342.1: 163268097-163268155 [+] UCSC Ensembl
Mir-544 CM014342.1: 163268872-163268928 [+] UCSC Ensembl
Mir-154-P24 CM014342.1: 163274493-163274550 [+] UCSC Ensembl
Mir-134 CM014342.1: 163274871-163274931 [+] UCSC Ensembl
Mir-154-P25 CM014342.1: 163275605-163275663 [+] UCSC Ensembl
Mir-154-P6b CM014342.1: 163276404-163276460 [+] UCSC Ensembl
Mir-154-P26 CM014342.1: 163279927-163279984 [+] UCSC Ensembl
Mir-154-P28-v2 CM014342.1: 163280786-163280841 [+] UCSC Ensembl
Mir-154-P28-v1 CM014342.1: 163280787-163280840 [+] UCSC Ensembl
Mir-154-P29 CM014342.1: 163282167-163282226 [+] UCSC Ensembl
Mir-541 CM014342.1: 163284614-163284679 [+] UCSC Ensembl
Mir-154-P30 CM014342.1: 163285427-163285480 [+] UCSC Ensembl
Mir-154-P31 CM014342.1: 163285578-163285632 [+] UCSC Ensembl
Mir-154-P32 CM014342.1: 163285718-163285773 [+] UCSC Ensembl
Mir-154-P33 CM014342.1: 163286036-163286092 [+] UCSC Ensembl
Mir-154-P34 CM014342.1: 163286843-163286898 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAGUCAGCGCUGCUCAGUGGUACCUGAAAUAGGUUGUCUGUGAGGUGUUCACUUUCUAUAUGAUGAAUAUUAUACAGUCAACCUCUUUCCGAUAUCGAAUCCCACCUUGGAUGCCU
Get precursor sequence
Structure
        10          20        30        40        50       
GAGUCAGCGCUGCUCAG--|    CCU    U      U     AG       CUUUC 
                   UGGUA   GAAA AGGUUG CUGUG  GUGUUCA     U
                   GCUAU   CUUU UCCAAC GACAU  UAUAAGU     A
UCCGUAGGUUCCACCCUAA^    AGC    C      U     AU       AGUAU 
    110       100        90        80        70        60
Deep sequencing
3' NTU No
MotifsCNNC at 3p(+17)
Star sequence

Mml-Mir-154-P34_5p*
mirBase accessionMIMAT0026906
Sequence 
0- AGGUUGUCUGUGAGGUGUUCA -21
Get sequence
Proposed targets TargetScanVert: mml-miR-656-5p
Mature sequence

Mml-Mir-154-P34_3p
mirBase accessionMIMAT0006497
Sequence 
35- AAUAUUAUACAGUCAACCUCU -56
Get sequence
Proposed targets TargetScanVert: mml-miR-656-3p