MirGeneDB 3.0
MirGeneDB ID

Ete-Mir-154-P34

Family name MIR-154 (all species)
Seed AUAUUAU
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues Ete-Mir-154-P1  Ete-Mir-154-P2-v1  Ete-Mir-154-P2-v2  Ete-Mir-154-P3-v1  Ete-Mir-154-P3-v2  Ete-Mir-154-P4  Ete-Mir-154-P5  Ete-Mir-154-P6a-v1  Ete-Mir-154-P6a-v2  Ete-Mir-154-P7  Ete-Mir-154-P8a  Ete-Mir-154-P8b  Ete-Mir-154-P9  Ete-Mir-154-P10  Ete-Mir-154-P11  Ete-Mir-154-P12  Ete-Mir-154-P16  Ete-Mir-154-P17  Ete-Mir-154-P18  Ete-Mir-154-P19  Ete-Mir-154-P20  Ete-Mir-154-P21  Ete-Mir-154-P22  Ete-Mir-154-P23  Ete-Mir-154-P24  Ete-Mir-154-P26  Ete-Mir-154-P27  Ete-Mir-154-P28-v1  Ete-Mir-154-P28-v2  Ete-Mir-154-P29  Ete-Mir-154-P30  Ete-Mir-154-P31  Ete-Mir-154-P32  Ete-Mir-154-P33 
Orthologues Bta-Mir-154-P34  Cfa-Mir-154-P34  Cja-Mir-154-P34  Cpo-Mir-154-P34  Dno-Mir-154-P34  Eca-Mir-154-P34  Hsa-Mir-154-P34  Laf-Mir-154-P34  Mml-Mir-154-P34  Mmr-Mir-154-P34  Ocu-Mir-154-P34  Pab-Mir-154-P34 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(echTel2)		 JH980297: 82276695-82276750 [-] UCSC
Precursor
(pre-Mir +30nt flank)
GAUUCAGCACGGCUCGGUGGUCCCUGGAAUAGGUUGCCUGUGAGGUGUUCACUUUCUAUAUGAUGAAUAUUAUACAGUCAACCUCUUUCCGGUAUCGAAUUCCACCUCCUCGGACA
Get precursor sequence
Structure
        10          20        30         40        50       
GAUUCAGCACGGCUCGG--|   C  U    U-      C     AG       CUUUC 
                   UGGU CC GGAA  AGGUUG CUGUG  GUGUUCA     U
                   GCUA GG CCUU  UCCAAC GACAU  UAUAAGU     A
ACAGGCUCCUCCACCUUAA^   U  -    UC      U     AU       AGUAU 
    110       100         90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Ete-Mir-154-P34_5p* (predicted)
mirBase accessionNone
Sequence 
0- AGGUUGCCUGUGAGGUGUUCA -21
Get sequence
Mature sequence

Ete-Mir-154-P34_3p (predicted)
mirBase accessionNone
Sequence 
35- AAUAUUAUACAGUCAACCUCU -56
Get sequence