MirGeneDB 3.0
MirGeneDB ID

Ete-Mir-154-P10

Family name MIR-154 (all species)
Seed AGGUCAC
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues Ete-Mir-154-P1  Ete-Mir-154-P2-v1  Ete-Mir-154-P2-v2  Ete-Mir-154-P3-v1  Ete-Mir-154-P3-v2  Ete-Mir-154-P4  Ete-Mir-154-P5  Ete-Mir-154-P6a-v1  Ete-Mir-154-P6a-v2  Ete-Mir-154-P7  Ete-Mir-154-P8a  Ete-Mir-154-P8b  Ete-Mir-154-P9  Ete-Mir-154-P11  Ete-Mir-154-P12  Ete-Mir-154-P16  Ete-Mir-154-P17  Ete-Mir-154-P18  Ete-Mir-154-P19  Ete-Mir-154-P20  Ete-Mir-154-P21  Ete-Mir-154-P22  Ete-Mir-154-P23  Ete-Mir-154-P24  Ete-Mir-154-P26  Ete-Mir-154-P27  Ete-Mir-154-P28-v1  Ete-Mir-154-P28-v2  Ete-Mir-154-P29  Ete-Mir-154-P30  Ete-Mir-154-P31  Ete-Mir-154-P32  Ete-Mir-154-P33  Ete-Mir-154-P34 
Orthologues Bta-Mir-154-P10  Cfa-Mir-154-P10  Cja-Mir-154-P10  Cpo-Mir-154-P10  Dno-Mir-154-P10  Eca-Mir-154-P10  Hsa-Mir-154-P10  Laf-Mir-154-P10  Mml-Mir-154-P10  Mmr-Mir-154-P10  Mmu-Mir-154-P10-v1  Mmu-Mir-154-P10-v2  Pab-Mir-154-P10  Rno-Mir-154-P10 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(echTel2)		 JH980297: 82308168-82308225 [-] UCSC
Precursor
(pre-Mir +30nt flank)
GCGGUGCCAGUGUUCCAGGGUAUCUGAGAGAAUGGUCGACUGGUGACGUGCACUUCAUUUAUGUUGUAGGUCACCAGUUUGACUCUCUAUCAGCACCCAACCCAACUUGGUGCACAUG
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Structure
        10           20        30         40        50        
GCGGUGCCAGUGUUCCA---|   AU    G   AU      -        G    CUUCA 
                    GGGU  CUGA AGA  GGUCGA CUGGUGAC UGCA     U
                    CCCA  GACU UCU  UCAGUU GACCACUG AUGU     U
GUACACGUGGUUCAACCCAA^   C-    A   C-      U        G    UGUAU 
      110       100         90         80        70        60
Deep sequencing
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CommentThe Drosha cut is shifted -1 relative to the other mammals.
3' NTU No
MotifsNo
Tissue expression
-   +
To
Star sequence

Ete-Mir-154-P10_5p*
mirBase accessionNone
Sequence 
0- AAUGGUCGACUGGUGACGUGCA -22
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Mature sequence

Ete-Mir-154-P10_3p
mirBase accessionNone
Sequence 
36- UAGGUCACCAGUUUGACUCUCU -58
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