MirGeneDB 3.0
MirGeneDB ID

Ete-Mir-154-P28-v1

Family name MIR-154 (all species)
Seed GAGUAUU
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues Ete-Mir-154-P1  Ete-Mir-154-P2-v1  Ete-Mir-154-P2-v2  Ete-Mir-154-P3-v1  Ete-Mir-154-P3-v2  Ete-Mir-154-P4  Ete-Mir-154-P5  Ete-Mir-154-P6a-v1  Ete-Mir-154-P6a-v2  Ete-Mir-154-P7  Ete-Mir-154-P8a  Ete-Mir-154-P8b  Ete-Mir-154-P9  Ete-Mir-154-P10  Ete-Mir-154-P11  Ete-Mir-154-P12  Ete-Mir-154-P16  Ete-Mir-154-P17  Ete-Mir-154-P18  Ete-Mir-154-P19  Ete-Mir-154-P20  Ete-Mir-154-P21  Ete-Mir-154-P22  Ete-Mir-154-P23  Ete-Mir-154-P24  Ete-Mir-154-P26  Ete-Mir-154-P27  Ete-Mir-154-P28-v2  Ete-Mir-154-P29  Ete-Mir-154-P30  Ete-Mir-154-P31  Ete-Mir-154-P32  Ete-Mir-154-P33  Ete-Mir-154-P34 
Orthologues Bta-Mir-154-P28  Cfa-Mir-154-P28  Cja-Mir-154-P28  Cpo-Mir-154-P28-v1  Cpo-Mir-154-P28-v2  Dno-Mir-154-P28-v1  Dno-Mir-154-P28-v2  Eca-Mir-154-P28  Hsa-Mir-154-P28-v1  Hsa-Mir-154-P28-v2  Laf-Mir-154-P28  Mml-Mir-154-P28-v1  Mml-Mir-154-P28-v2  Mmr-Mir-154-P28  Mmu-Mir-154-P28-v1  Mmu-Mir-154-P28-v2  Ocu-Mir-154-P28-v1  Ocu-Mir-154-P28-v2  Pab-Mir-154-P28  Rno-Mir-154-P28-v1  Rno-Mir-154-P28-v2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(echTel2)		 JH980297: 82282453-82282506 [-] UCSC
Precursor
(pre-Mir +30nt flank)
GGCACACAGUCAGUCCGGUACUUGAAUGGAGGUUGUCCAUGGUGUGUUCAUUUUAUUUAUGAUGAGUAUUACAUGGCCAAUCUCCUUUCAGUACUAAAUUCGUCAUGGGAAACA
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Structure
        10           20        30        40        50      
GGCACACAGUCAGUCCG---|    U   U        U     GU         UUA 
                    GUACU GAA GGAGGUUG CCAUG  GUGUUCAUU   U
                    CAUGA CUU CCUCUAAC GGUAC  UAUGAGUAG   U
ACAAAGGGUACUGCUUAAAU^    -   U        C     AU         UAU 
  110       100        90         80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Ete-Mir-154-P28-v1_5p* (predicted)
mirBase accessionNone
Sequence 
0- GGUUGUCCAUGGUGUGUUCAUU -22
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Mature sequence

Ete-Mir-154-P28-v1_3p
mirBase accessionNone
Sequence 
32- UGAGUAUUACAUGGCCAAUCUC -54
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