MirGeneDB 3.0
MirGeneDB ID

Ete-Mir-154-P9

Family name MIR-154 (all species)
Seed GAAACAU
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues Ete-Mir-154-P1  Ete-Mir-154-P2-v1  Ete-Mir-154-P2-v2  Ete-Mir-154-P3-v1  Ete-Mir-154-P3-v2  Ete-Mir-154-P4  Ete-Mir-154-P5  Ete-Mir-154-P6a-v1  Ete-Mir-154-P6a-v2  Ete-Mir-154-P7  Ete-Mir-154-P8a  Ete-Mir-154-P8b  Ete-Mir-154-P10  Ete-Mir-154-P11  Ete-Mir-154-P12  Ete-Mir-154-P16  Ete-Mir-154-P17  Ete-Mir-154-P18  Ete-Mir-154-P19  Ete-Mir-154-P20  Ete-Mir-154-P21  Ete-Mir-154-P22  Ete-Mir-154-P23  Ete-Mir-154-P24  Ete-Mir-154-P26  Ete-Mir-154-P27  Ete-Mir-154-P28-v1  Ete-Mir-154-P28-v2  Ete-Mir-154-P29  Ete-Mir-154-P30  Ete-Mir-154-P31  Ete-Mir-154-P32  Ete-Mir-154-P33  Ete-Mir-154-P34 
Orthologues Bta-Mir-154-P9  Cfa-Mir-154-P9  Cja-Mir-154-P9  Cpo-Mir-154-P9  Dno-Mir-154-P9  Eca-Mir-154-P9  Hsa-Mir-154-P9  Laf-Mir-154-P9  Mml-Mir-154-P9  Mmr-Mir-154-P9  Mmu-Mir-154-P9  Pab-Mir-154-P9  Rno-Mir-154-P9 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(echTel2)		 JH980297: 82308566-82308621 [-] UCSC
Precursor
(pre-Mir +30nt flank)
AUCAGUGCUCACCGUAGAUACUCGAAGGGGAGGUUGUCCGUGUUGUCUUCUGUUCAUCUACGAUGAAACAUACACGGGGAAUCUCUUUUUUAGUAUCAAACCCCACCCUGUAGGCC
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Structure
        10           20        30        40         50       
AUCAGUGCUCACCGUAG---|    C            G       -   C   UGUUCA 
                    AUACU GAAGGGGAGGUU UCCGUGU UGU UUC      U
                    UAUGA UUUUUUCUCUAA GGGCACA ACA AAG      C
CCGGAUGUCCCACCCCAAAC^    -            G       U   -   UAGCAU 
    110       100         90        80        70         60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Ete-Mir-154-P9_5p* (predicted)
mirBase accessionNone
Sequence 
0- AGGUUGUCCGUGUUGUCUUCUGU -23
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Mature sequence

Ete-Mir-154-P9_3p
mirBase accessionNone
Sequence 
33- UGAAACAUACACGGGGAAUCUCU -56
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