MirGeneDB 3.0
MirGeneDB ID

Ete-Mir-154-P20

Family name MIR-154 (all species)
Seed UAAUAUC
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues Ete-Mir-154-P1  Ete-Mir-154-P2-v1  Ete-Mir-154-P2-v2  Ete-Mir-154-P3-v1  Ete-Mir-154-P3-v2  Ete-Mir-154-P4  Ete-Mir-154-P5  Ete-Mir-154-P6a-v1  Ete-Mir-154-P6a-v2  Ete-Mir-154-P7  Ete-Mir-154-P8a  Ete-Mir-154-P8b  Ete-Mir-154-P9  Ete-Mir-154-P10  Ete-Mir-154-P11  Ete-Mir-154-P12  Ete-Mir-154-P16  Ete-Mir-154-P17  Ete-Mir-154-P18  Ete-Mir-154-P19  Ete-Mir-154-P21  Ete-Mir-154-P22  Ete-Mir-154-P23  Ete-Mir-154-P24  Ete-Mir-154-P26  Ete-Mir-154-P27  Ete-Mir-154-P28-v1  Ete-Mir-154-P28-v2  Ete-Mir-154-P29  Ete-Mir-154-P30  Ete-Mir-154-P31  Ete-Mir-154-P32  Ete-Mir-154-P33  Ete-Mir-154-P34 
Orthologues Cfa-Mir-154-P20  Cja-Mir-154-P20  Cpo-Mir-154-P20  Dno-Mir-154-P20  Eca-Mir-154-P20  Hsa-Mir-154-P20  Laf-Mir-154-P20  Mml-Mir-154-P20  Mmr-Mir-154-P20  Ocu-Mir-154-P20  Pab-Mir-154-P20 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(echTel2)		 JH980297: 82293709-82293767 [-] UCSC
Precursor
(pre-Mir +30nt flank)
CCUGCUGGUACGAUUCUUUGGUGCUUAAAGAAUGGCUGUCCGUAGUAUGGUCUCUAUAUUUAUGAUGAUUAAUAUCGGACAACCAUUGUUUUAGUAUCCAAAUUGCCUUCAGUUUCUCA
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Structure
        10         20         30        40        50         
CCUGCUGGUACGAUUCU-    -|   U   G     C      UAGUA     UCUAUA 
                  UUGG UGCU AAA AAUGG UGUCCG     UGGUC      U
                  AACC AUGA UUU UUACC ACAGGC     AUUAG      U
ACUCUUUGACUUCCGUUA    U^   U   G     A      UAUA-     UAGUAU 
       110       100        90        80         70        60
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Ete-Mir-154-P20_5p* (predicted)
mirBase accessionNone
Sequence 
0- AAUGGCUGUCCGUAGUAUGGUC -22
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Mature sequence

Ete-Mir-154-P20_3p (predicted)
mirBase accessionNone
Sequence 
38- UUAAUAUCGGACAACCAUUGU -59
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