MirGeneDB 3.0
MirGeneDB ID

Ete-Mir-154-P29

Family name MIR-154 (all species)
Seed UCACACA
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues Ete-Mir-154-P1  Ete-Mir-154-P2-v1  Ete-Mir-154-P2-v2  Ete-Mir-154-P3-v1  Ete-Mir-154-P3-v2  Ete-Mir-154-P4  Ete-Mir-154-P5  Ete-Mir-154-P6a-v1  Ete-Mir-154-P6a-v2  Ete-Mir-154-P7  Ete-Mir-154-P8a  Ete-Mir-154-P8b  Ete-Mir-154-P9  Ete-Mir-154-P10  Ete-Mir-154-P11  Ete-Mir-154-P12  Ete-Mir-154-P16  Ete-Mir-154-P17  Ete-Mir-154-P18  Ete-Mir-154-P19  Ete-Mir-154-P20  Ete-Mir-154-P21  Ete-Mir-154-P22  Ete-Mir-154-P23  Ete-Mir-154-P24  Ete-Mir-154-P26  Ete-Mir-154-P27  Ete-Mir-154-P28-v1  Ete-Mir-154-P28-v2  Ete-Mir-154-P30  Ete-Mir-154-P31  Ete-Mir-154-P32  Ete-Mir-154-P33  Ete-Mir-154-P34 
Orthologues Bta-Mir-154-P29  Cfa-Mir-154-P29  Cja-Mir-154-P29  Cpo-Mir-154-P29  Dno-Mir-154-P29  Eca-Mir-154-P29  Hsa-Mir-154-P29  Laf-Mir-154-P29  Mml-Mir-154-P29  Mmr-Mir-154-P29  Mmu-Mir-154-P29  Ocu-Mir-154-P29  Pab-Mir-154-P29  Rno-Mir-154-P29 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(echTel2)		 JH980297: 82280825-82280884 [-] UCSC
Precursor
(pre-Mir +30nt flank)
CUUGCUCGUACUGACCUUUGAUCCCUGAGCAGGGGUUGCUCUUGGUGAAUUCGCUUUAUUCUUGUUGAAUCACACAAAGGUAACUUUGGUUUGCAUAUCAAAUCCUGCCUGGCAUGGUUU
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Structure
        10          20        30        40         50         
CUUGCUCGUACUGACCU--     CCC     AG       UC   -|   A   GCUUUA 
                   UUGAU   UGAGC  GGGUUGC  UUG GUGA UUC      U
                   AACUA   GUUUG  UUCAAUG  AAC CACU AAG      U
UUUGGUACGGUCCGUCCUA     UAC     GU       GA   A^   -   UUGUUC 
.       110       100        90        80        70         60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
To
Star sequence

Ete-Mir-154-P29_5p* (predicted)
mirBase accessionNone
Sequence 
0- AGGGGUUGCUCUUGGUGAAUUC -22
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Mature sequence

Ete-Mir-154-P29_3p (predicted)
mirBase accessionNone
Sequence 
38- AUCACACAAAGGUAACUUUGGU -60
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