MirGeneDB 3.0
MirGeneDB ID

Ete-Mir-154-P22

Family name MIR-154 (all species)
Seed GUUGAUC
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues Ete-Mir-154-P1  Ete-Mir-154-P2-v1  Ete-Mir-154-P2-v2  Ete-Mir-154-P3-v1  Ete-Mir-154-P3-v2  Ete-Mir-154-P4  Ete-Mir-154-P5  Ete-Mir-154-P6a-v1  Ete-Mir-154-P6a-v2  Ete-Mir-154-P7  Ete-Mir-154-P8a  Ete-Mir-154-P8b  Ete-Mir-154-P9  Ete-Mir-154-P10  Ete-Mir-154-P11  Ete-Mir-154-P12  Ete-Mir-154-P16  Ete-Mir-154-P17  Ete-Mir-154-P18  Ete-Mir-154-P19  Ete-Mir-154-P20  Ete-Mir-154-P21  Ete-Mir-154-P23  Ete-Mir-154-P24  Ete-Mir-154-P26  Ete-Mir-154-P27  Ete-Mir-154-P28-v1  Ete-Mir-154-P28-v2  Ete-Mir-154-P29  Ete-Mir-154-P30  Ete-Mir-154-P31  Ete-Mir-154-P32  Ete-Mir-154-P33  Ete-Mir-154-P34 
Orthologues Bta-Mir-154-P22  Cfa-Mir-154-P22  Cja-Mir-154-P22  Cpo-Mir-154-P22  Dno-Mir-154-P22  Eca-Mir-154-P22  Laf-Mir-154-P22  Mmr-Mir-154-P22 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(echTel2)		 JH980297: 82289866-82289919 [-] UCSC
Precursor
(pre-Mir +30nt flank)
GUCUGGAACCUCCAUGAUAGGGGGAUGGAUGGUUGAUCAGAGAGCAUACAUUUUACAAACGAUGUAUAUCAACUGAUCCACAGUCCUUCCCUGUCCCUUGACUUCCAGGAGGGA
Get precursor sequence
Structure
        10        20          30        40         50      
GUCUGGAACCUCCAUGAUAG--     U    G  U      A-| GC       UUA 
                      GGGGA GGAU GU GAUCAG  GA  AUACAUU   C
                      UCCCU CCUG CA CUAGUC  CU  UAUGUAG   A
AGGGAGGACCUUCAGUUCCCUG     U    A  C      AA^ A-       CAA 
  110       100        90        80        70         60
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Ete-Mir-154-P22_5p
mirBase accessionNone
Sequence 
0- GGUUGAUCAGAGAGCAUACAUU -22
Get sequence
Star sequence

Ete-Mir-154-P22_3p*
mirBase accessionNone
Sequence 
32- UGUAUAUCAACUGAUCCACAGU -54
Get sequence