MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-154-P22

Family name MIR-154 (all species)
Seed GUUGAUC
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues Laf-Mir-154-P1  Laf-Mir-154-P2  Laf-Mir-154-P3  Laf-Mir-154-P4  Laf-Mir-154-P5  Laf-Mir-154-P6a  Laf-Mir-154-P6b  Laf-Mir-154-P6c  Laf-Mir-154-P7  Laf-Mir-154-P8  Laf-Mir-154-P9  Laf-Mir-154-P10  Laf-Mir-154-P11  Laf-Mir-154-P12  Laf-Mir-154-P15  Laf-Mir-154-P16  Laf-Mir-154-P17  Laf-Mir-154-P18  Laf-Mir-154-P19  Laf-Mir-154-P20  Laf-Mir-154-P21  Laf-Mir-154-P23  Laf-Mir-154-P24  Laf-Mir-154-P25  Laf-Mir-154-P26  Laf-Mir-154-P27  Laf-Mir-154-P28  Laf-Mir-154-P29  Laf-Mir-154-P30  Laf-Mir-154-P31  Laf-Mir-154-P32  Laf-Mir-154-P33  Laf-Mir-154-P34 
Orthologues Bta-Mir-154-P22  Cfa-Mir-154-P22  Cja-Mir-154-P22  Cpo-Mir-154-P22  Dno-Mir-154-P22  Eca-Mir-154-P22  Ete-Mir-154-P22  Mmr-Mir-154-P22 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010036.1: 75532426-75532479 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUGGAACCUCUCCAUGAUAGGGGAAUGGAUGGUUGAUCAGAGAACAUACAUUUUGCAAAUGAUGUAUGUCAACUGAUCCACAGUCCCUACCUAUCCCGUGACUUCUUAGGAUGG
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Structure
        10            20        30        40        50      
CUGGAACCUCUCCAUGA----|   GGAAU    G  U      AGA         UUG 
                     UAGG     GGAU GU GAUCAG   ACAUACAUU   C
                     AUCC     CCUG CA CUAGUC   UGUAUGUAG   A
GGUAGGAUUCUUCAGUGCCCU^   AUC--    A  C      AAC         UAA 
  110       100        90          80        70        60
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Wh
Mature sequence

Laf-Mir-154-P22_5p (predicted)
mirBase accessionNone
Sequence 
0- GGUUGAUCAGAGAACAUACAUU -22
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Co-mature sequence

Laf-Mir-154-P22_3p (predicted)
mirBase accessionNone
Sequence 
32- UGUAUGUCAACUGAUCCACAGU -54
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