MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-154-P28

Family name MIR-154 (all species)
Seed GAGUAUU
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues Laf-Mir-154-P1  Laf-Mir-154-P2  Laf-Mir-154-P3  Laf-Mir-154-P4  Laf-Mir-154-P5  Laf-Mir-154-P6a  Laf-Mir-154-P6b  Laf-Mir-154-P6c  Laf-Mir-154-P7  Laf-Mir-154-P8  Laf-Mir-154-P9  Laf-Mir-154-P10  Laf-Mir-154-P11  Laf-Mir-154-P12  Laf-Mir-154-P15  Laf-Mir-154-P16  Laf-Mir-154-P17  Laf-Mir-154-P18  Laf-Mir-154-P19  Laf-Mir-154-P20  Laf-Mir-154-P21  Laf-Mir-154-P22  Laf-Mir-154-P23  Laf-Mir-154-P24  Laf-Mir-154-P25  Laf-Mir-154-P26  Laf-Mir-154-P27  Laf-Mir-154-P29  Laf-Mir-154-P30  Laf-Mir-154-P31  Laf-Mir-154-P32  Laf-Mir-154-P33  Laf-Mir-154-P34 
Orthologues Bta-Mir-154-P28  Cfa-Mir-154-P28  Cja-Mir-154-P28  Cpo-Mir-154-P28-v1  Cpo-Mir-154-P28-v2  Dno-Mir-154-P28-v1  Dno-Mir-154-P28-v2  Eca-Mir-154-P28  Ete-Mir-154-P28-v1  Ete-Mir-154-P28-v2  Hsa-Mir-154-P28-v1  Hsa-Mir-154-P28-v2  Mml-Mir-154-P28-v1  Mml-Mir-154-P28-v2  Mmr-Mir-154-P28  Mmu-Mir-154-P28-v1  Mmu-Mir-154-P28-v2  Ocu-Mir-154-P28-v1  Ocu-Mir-154-P28-v2  Pab-Mir-154-P28  Rno-Mir-154-P28-v1  Rno-Mir-154-P28-v2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010036.1: 75521503-75521556 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCGAGCACCACAGUCAGGUACUUGAAUGGAGGUUGUCCAUGAUGUGUUCAUUUUAUUUAUGAUGAGUAUUACAUGGCCAAUCUCCUUUCAGUACCACAUUCUUCUUGGGAAAAC
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Structure
        10           20        30        40        50      
GCGAGCACCACAGUCAG---|    U   U        U     AU         UUA 
                    GUACU GAA GGAGGUUG CCAUG  GUGUUCAUU   U
                    CAUGA CUU CCUCUAAC GGUAC  UAUGAGUAG   U
CAAAAGGGUUCUUCUUACAC^    -   U        C     AU         UAU 
  110       100        90         80        70        60
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Star sequence

Laf-Mir-154-P28_5p* (predicted)
mirBase accessionNone
Sequence 
0- GGUUGUCCAUGAUGUGUUCAUU -22
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Mature sequence

Laf-Mir-154-P28_3p
mirBase accessionNone
Sequence 
32- UGAGUAUUACAUGGCCAAUCUC -54
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