MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-154-P26

Family name MIR-154 (all species)
Seed AGGUUAU
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues Laf-Mir-154-P1  Laf-Mir-154-P2  Laf-Mir-154-P3  Laf-Mir-154-P4  Laf-Mir-154-P5  Laf-Mir-154-P6a  Laf-Mir-154-P6b  Laf-Mir-154-P6c  Laf-Mir-154-P7  Laf-Mir-154-P8  Laf-Mir-154-P9  Laf-Mir-154-P10  Laf-Mir-154-P11  Laf-Mir-154-P12  Laf-Mir-154-P15  Laf-Mir-154-P16  Laf-Mir-154-P17  Laf-Mir-154-P18  Laf-Mir-154-P19  Laf-Mir-154-P20  Laf-Mir-154-P21  Laf-Mir-154-P22  Laf-Mir-154-P23  Laf-Mir-154-P24  Laf-Mir-154-P25  Laf-Mir-154-P27  Laf-Mir-154-P28  Laf-Mir-154-P29  Laf-Mir-154-P30  Laf-Mir-154-P31  Laf-Mir-154-P32  Laf-Mir-154-P33  Laf-Mir-154-P34 
Orthologues Bta-Mir-154-P26  Cja-Mir-154-P26  Cpo-Mir-154-P26  Dno-Mir-154-P26  Eca-Mir-154-P26  Ete-Mir-154-P26  Hsa-Mir-154-P26  Mml-Mir-154-P26  Mmr-Mir-154-P26  Mmu-Mir-154-P26  Ocu-Mir-154-P26  Pab-Mir-154-P26  Rno-Mir-154-P26 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010036.1: 75522398-75522455 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUGUCGGUGCUAAUCCGUGGUACUUGAAGAUAGGUUAUCCGUGUUGCCUUCGCUUUAUUUGUGACGAAUCAUACACGGUUCACCUAUUUUUUAGUACCAAAUCCCGCCUUGAAGGGCU
Get precursor sequence
Structure
        10          20        30        40        50        
UUGUCGGUGCUAAUCCG--|      U          UAU      UGCC    CUUUA 
                   UGGUACU GAAGAUAGGU   CCGUGU    UUCG     U
                   ACCAUGA UUUUUAUCCA   GGCACA    AAGC     U
UCGGGAAGUUCCGCCCUAA^      U          CUU      UACU    AGUGU 
      110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Wh
Mature sequence

Laf-Mir-154-P26_5p (predicted)
mirBase accessionNone
Sequence 
0- UAGGUUAUCCGUGUUGCCUUCG -22
Get sequence
Star sequence

Laf-Mir-154-P26_3p* (predicted)
mirBase accessionNone
Sequence 
36- AAUCAUACACGGUUCACCUAUU -58
Get sequence