MirGeneDB ID | Laf-Mir-154-P25 |
---|---|
Family name | MIR-154 (all species) |
Seed | GAGGCUU |
Species | African bush elephant (Loxodonta africana) |
MiRBase ID | |
Paralogues | Laf-Mir-154-P1 Laf-Mir-154-P2 Laf-Mir-154-P3 Laf-Mir-154-P4 Laf-Mir-154-P5 Laf-Mir-154-P6a Laf-Mir-154-P6b Laf-Mir-154-P6c Laf-Mir-154-P7 Laf-Mir-154-P8 Laf-Mir-154-P9 Laf-Mir-154-P10 Laf-Mir-154-P11 Laf-Mir-154-P12 Laf-Mir-154-P15 Laf-Mir-154-P16 Laf-Mir-154-P17 Laf-Mir-154-P18 Laf-Mir-154-P19 Laf-Mir-154-P20 Laf-Mir-154-P21 Laf-Mir-154-P22 Laf-Mir-154-P23 Laf-Mir-154-P24 Laf-Mir-154-P26 Laf-Mir-154-P27 Laf-Mir-154-P28 Laf-Mir-154-P29 Laf-Mir-154-P30 Laf-Mir-154-P31 Laf-Mir-154-P32 Laf-Mir-154-P33 Laf-Mir-154-P34 |
Orthologues | Bta-Mir-154-P25 Cfa-Mir-154-P25 Cja-Mir-154-P25 Dno-Mir-154-P25 Eca-Mir-154-P25 Hsa-Mir-154-P25 Mml-Mir-154-P25 Mmr-Mir-154-P25 Mmu-Mir-154-P25 Ocu-Mir-154-P25 Pab-Mir-154-P25 Rno-Mir-154-P25 |
Node of Origin (locus) | Eutheria |
Node of Origin (family) | Eutheria |
Genome context (GCA_000001905.1_Loxafr3.0) |
GL010036.1: 75527246-75527302 [-] UCSC Ensembl |
Precursor (pre-Mir +30nt flank) | CUCACCAGUGUUCACGUGUGGUACUUGAAGAGAGGCUUGGCGUGAUGGAUCGAUUCAUUAAGCGAGUCAUACACGGCUCUCCUCUCUUUUAGUGUCAAAUGCUGCCUCGGAGGGCAUGet precursor sequence |
Structure | 10 20 30 40 50 CUCACCAGUGUUCACGUG-- GU U CUU - -| GA AUUC UG ACU GAAGAGAGG GG CGUG AUG UCG A AC UGA UUUCUCUCC UC GCAC UAC AGC U UACGGGAGGCUCCGUCGUAA UG U UC- G A^ UG GAAU 110 100 90 80 70 60 |
Deep sequencing | |
3' NTU | Unknown |
Motifs | UG at 5p(-14), CNNC at 3p(+17) |
Mature sequence | Laf-Mir-154-P25_5p (predicted) |
mirBase accession | None |
Sequence |
0- AGAGGCUUGGCGUGAUGGAUCG -22
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|
Co-mature sequence | Laf-Mir-154-P25_3p |
mirBase accession | None |
Sequence |
34- AGUCAUACACGGCUCUCCUCUCU -57
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|