MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-154-P25

Family name MIR-154 (all species)
Seed GAGGCUU
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues Laf-Mir-154-P1  Laf-Mir-154-P2  Laf-Mir-154-P3  Laf-Mir-154-P4  Laf-Mir-154-P5  Laf-Mir-154-P6a  Laf-Mir-154-P6b  Laf-Mir-154-P6c  Laf-Mir-154-P7  Laf-Mir-154-P8  Laf-Mir-154-P9  Laf-Mir-154-P10  Laf-Mir-154-P11  Laf-Mir-154-P12  Laf-Mir-154-P15  Laf-Mir-154-P16  Laf-Mir-154-P17  Laf-Mir-154-P18  Laf-Mir-154-P19  Laf-Mir-154-P20  Laf-Mir-154-P21  Laf-Mir-154-P22  Laf-Mir-154-P23  Laf-Mir-154-P24  Laf-Mir-154-P26  Laf-Mir-154-P27  Laf-Mir-154-P28  Laf-Mir-154-P29  Laf-Mir-154-P30  Laf-Mir-154-P31  Laf-Mir-154-P32  Laf-Mir-154-P33  Laf-Mir-154-P34 
Orthologues Bta-Mir-154-P25  Cfa-Mir-154-P25  Cja-Mir-154-P25  Dno-Mir-154-P25  Eca-Mir-154-P25  Hsa-Mir-154-P25  Mml-Mir-154-P25  Mmr-Mir-154-P25  Mmu-Mir-154-P25  Ocu-Mir-154-P25  Pab-Mir-154-P25  Rno-Mir-154-P25 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010036.1: 75527246-75527302 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUCACCAGUGUUCACGUGUGGUACUUGAAGAGAGGCUUGGCGUGAUGGAUCGAUUCAUUAAGCGAGUCAUACACGGCUCUCCUCUCUUUUAGUGUCAAAUGCUGCCUCGGAGGGCAU
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Structure
        10          20        30        40          50       
CUCACCAGUGUUCACGUG--  GU   U         CUU  -    -|  GA   AUUC 
                    UG  ACU GAAGAGAGG   GG CGUG AUG  UCG    A
                    AC  UGA UUUCUCUCC   UC GCAC UAC  AGC    U
UACGGGAGGCUCCGUCGUAA  UG   U         UC-  G    A^  UG   GAAU 
     110       100        90        80         70        60
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Wh
Mature sequence

Laf-Mir-154-P25_5p (predicted)
mirBase accessionNone
Sequence 
0- AGAGGCUUGGCGUGAUGGAUCG -22
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Co-mature sequence

Laf-Mir-154-P25_3p
mirBase accessionNone
Sequence 
34- AGUCAUACACGGCUCUCCUCUCU -57
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