MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-154-P17

Family name MIR-154 (all species)
Seed AUACAAG
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues Laf-Mir-154-P1  Laf-Mir-154-P2  Laf-Mir-154-P3  Laf-Mir-154-P4  Laf-Mir-154-P5  Laf-Mir-154-P6a  Laf-Mir-154-P6b  Laf-Mir-154-P6c  Laf-Mir-154-P7  Laf-Mir-154-P8  Laf-Mir-154-P9  Laf-Mir-154-P10  Laf-Mir-154-P11  Laf-Mir-154-P12  Laf-Mir-154-P15  Laf-Mir-154-P16  Laf-Mir-154-P18  Laf-Mir-154-P19  Laf-Mir-154-P20  Laf-Mir-154-P21  Laf-Mir-154-P22  Laf-Mir-154-P23  Laf-Mir-154-P24  Laf-Mir-154-P25  Laf-Mir-154-P26  Laf-Mir-154-P27  Laf-Mir-154-P28  Laf-Mir-154-P29  Laf-Mir-154-P30  Laf-Mir-154-P31  Laf-Mir-154-P32  Laf-Mir-154-P33  Laf-Mir-154-P34 
Orthologues Bta-Mir-154-P17  Cfa-Mir-154-P17  Cja-Mir-154-P17  Cpo-Mir-154-P17  Dno-Mir-154-P17  Eca-Mir-154-P17  Ete-Mir-154-P17  Hsa-Mir-154-P17  Mml-Mir-154-P17  Mmr-Mir-154-P17  Mmu-Mir-154-P17  Ocu-Mir-154-P17  Pab-Mir-154-P17  Rno-Mir-154-P17 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010036.1: 75538378-75538440 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACCUGCCCAAUGCUACCGUUUGGUACUUAGAGUGAGGUUACCAUUUGUAUAUUCAGUUUCUUGACAUGGAAUAUACAAGGGCAAGCUCUCUGUGAGCAUCAGACCUUGUCUGGGAGGCUCUUU
Get precursor sequence
Structure
        10          20        30        40        50        60 
ACCUGCCCAAUGCUACC--|      A    G  U   G  A  A          CAGUUUC 
                   GUUUGGU CUUA AG GAG UU CC UUUGUAUAUU       U
                   CAGACUA GAGU UC CUC AA GG GAACAUAUAA       U
UUUCUCGGAGGGUCUGUUC^      C    G  U   G  C  -          GGUACAG 
 120       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
-   +
Wh
Star sequence

Laf-Mir-154-P17_5p* (predicted)
mirBase accessionNone
Sequence 
0- AGUGAGGUUACCAUUUGUAUAUU -23
Get sequence
Mature sequence

Laf-Mir-154-P17_3p
mirBase accessionNone
Sequence 
41- UAUACAAGGGCAAGCUCUCUGU -63
Get sequence