MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-154-P24

Family name MIR-154 (all species)
Seed AAGUUGU
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues Laf-Mir-154-P1  Laf-Mir-154-P2  Laf-Mir-154-P3  Laf-Mir-154-P4  Laf-Mir-154-P5  Laf-Mir-154-P6a  Laf-Mir-154-P6b  Laf-Mir-154-P6c  Laf-Mir-154-P7  Laf-Mir-154-P8  Laf-Mir-154-P9  Laf-Mir-154-P10  Laf-Mir-154-P11  Laf-Mir-154-P12  Laf-Mir-154-P15  Laf-Mir-154-P16  Laf-Mir-154-P17  Laf-Mir-154-P18  Laf-Mir-154-P19  Laf-Mir-154-P20  Laf-Mir-154-P21  Laf-Mir-154-P22  Laf-Mir-154-P23  Laf-Mir-154-P25  Laf-Mir-154-P26  Laf-Mir-154-P27  Laf-Mir-154-P28  Laf-Mir-154-P29  Laf-Mir-154-P30  Laf-Mir-154-P31  Laf-Mir-154-P32  Laf-Mir-154-P33  Laf-Mir-154-P34 
Orthologues Bta-Mir-154-P24  Cfa-Mir-154-P24  Cja-Mir-154-P24  Cpo-Mir-154-P24  Dno-Mir-154-P24  Eca-Mir-154-P24  Ete-Mir-154-P24  Hsa-Mir-154-P24  Mml-Mir-154-P24  Mmr-Mir-154-P24  Mmu-Mir-154-P24  Ocu-Mir-154-P24  Pab-Mir-154-P24  Rno-Mir-154-P24 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010036.1: 75528356-75528413 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCUUGUCUGAGUUUCUGUGGUACUUGAAGAGAAGUUGUUCGUGGUGGAUUCGCUUUACUUAUGACGAAUCAUUCACGGACAACACUUUUUUCAGUACCAAAUACUACCUCUAAGGACA
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Structure
        10          20        30         40        50        
UCUUGUCUGAGUUUCUG--|      U       A-           UG      CUUUA 
                   UGGUACU GAAGAGA  GUUGUUCGUGG  GAUUCG     C
                   ACCAUGA CUUUUUU  CAACAGGCACU  CUAAGC     U
ACAGGAAUCUCCAUCAUAA^      -       CA           UA      AGUAU 
      110       100         90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Wh
Mature sequence

Laf-Mir-154-P24_5p
mirBase accessionNone
Sequence 
0- GAAGUUGUUCGUGGUGGAUUCG -22
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Star sequence

Laf-Mir-154-P24_3p* (predicted)
mirBase accessionNone
Sequence 
36- AAUCAUUCACGGACAACACUUU -58
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