MirGeneDB 3.0
MirGeneDB ID

Ete-Mir-154-P24

Family name MIR-154 (all species)
Seed AAGUUGU
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues Ete-Mir-154-P1  Ete-Mir-154-P2-v1  Ete-Mir-154-P2-v2  Ete-Mir-154-P3-v1  Ete-Mir-154-P3-v2  Ete-Mir-154-P4  Ete-Mir-154-P5  Ete-Mir-154-P6a-v1  Ete-Mir-154-P6a-v2  Ete-Mir-154-P7  Ete-Mir-154-P8a  Ete-Mir-154-P8b  Ete-Mir-154-P9  Ete-Mir-154-P10  Ete-Mir-154-P11  Ete-Mir-154-P12  Ete-Mir-154-P16  Ete-Mir-154-P17  Ete-Mir-154-P18  Ete-Mir-154-P19  Ete-Mir-154-P20  Ete-Mir-154-P21  Ete-Mir-154-P22  Ete-Mir-154-P23  Ete-Mir-154-P26  Ete-Mir-154-P27  Ete-Mir-154-P28-v1  Ete-Mir-154-P28-v2  Ete-Mir-154-P29  Ete-Mir-154-P30  Ete-Mir-154-P31  Ete-Mir-154-P32  Ete-Mir-154-P33  Ete-Mir-154-P34 
Orthologues Bta-Mir-154-P24  Cfa-Mir-154-P24  Cja-Mir-154-P24  Cpo-Mir-154-P24  Dno-Mir-154-P24  Eca-Mir-154-P24  Hsa-Mir-154-P24  Laf-Mir-154-P24  Mml-Mir-154-P24  Mmr-Mir-154-P24  Mmu-Mir-154-P24  Ocu-Mir-154-P24  Pab-Mir-154-P24  Rno-Mir-154-P24 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(echTel2)		 JH980297: 82286121-82286178 [-] UCSC
Precursor
(pre-Mir +30nt flank)
CAUGUCCUUGCAUUCUGGGGUACUUGAAGAGAAGUUGUUCGUGGUGGAUUCGCUGUACUUGUGACGAAUCAUUCACGGACAACACUUUUUUCAGUACCAAAUGCUGCCUCCAAGGUGU
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Structure
        10          20        30         40        50        
CAUGUCCUUGCAUUCUGG--|     U       A-           UG      CUGUA 
                    GGUACU GAAGAGA  GUUGUUCGUGG  GAUUCG     C
                    CCAUGA CUUUUUU  CAACAGGCACU  CUAAGC     U
UGUGGAACCUCCGUCGUAAA^     -       CA           UA      AGUGU 
      110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Ete-Mir-154-P24_5p
mirBase accessionNone
Sequence 
0- GAAGUUGUUCGUGGUGGAUUCG -22
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Star sequence

Ete-Mir-154-P24_3p*
mirBase accessionNone
Sequence 
36- AAUCAUUCACGGACAACACUUU -58
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