MirGeneDB 3.0
MirGeneDB ID

Ete-Mir-154-P17

Family name MIR-154 (all species)
Seed AUACAAG
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues Ete-Mir-154-P1  Ete-Mir-154-P2-v1  Ete-Mir-154-P2-v2  Ete-Mir-154-P3-v1  Ete-Mir-154-P3-v2  Ete-Mir-154-P4  Ete-Mir-154-P5  Ete-Mir-154-P6a-v1  Ete-Mir-154-P6a-v2  Ete-Mir-154-P7  Ete-Mir-154-P8a  Ete-Mir-154-P8b  Ete-Mir-154-P9  Ete-Mir-154-P10  Ete-Mir-154-P11  Ete-Mir-154-P12  Ete-Mir-154-P16  Ete-Mir-154-P18  Ete-Mir-154-P19  Ete-Mir-154-P20  Ete-Mir-154-P21  Ete-Mir-154-P22  Ete-Mir-154-P23  Ete-Mir-154-P24  Ete-Mir-154-P26  Ete-Mir-154-P27  Ete-Mir-154-P28-v1  Ete-Mir-154-P28-v2  Ete-Mir-154-P29  Ete-Mir-154-P30  Ete-Mir-154-P31  Ete-Mir-154-P32  Ete-Mir-154-P33  Ete-Mir-154-P34 
Orthologues Bta-Mir-154-P17  Cfa-Mir-154-P17  Cja-Mir-154-P17  Cpo-Mir-154-P17  Dno-Mir-154-P17  Eca-Mir-154-P17  Hsa-Mir-154-P17  Laf-Mir-154-P17  Mml-Mir-154-P17  Mmr-Mir-154-P17  Mmu-Mir-154-P17  Ocu-Mir-154-P17  Pab-Mir-154-P17  Rno-Mir-154-P17 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(echTel2)		 JH980297: 82295571-82295632 [-] UCSC
Precursor
(pre-Mir +30nt flank)
ACCUGCCCAGUGCUACUGUUUGGUACUUAACGCGAGGUUGCCUUGGUAUAUUCGGUUUAUUGACGUGGAAUAUACAAGGGCAAGCUCUCUGUGAGUAUCAAACUUUGUCCGGGAAGCUUCUU
Get precursor sequence
Structure
        10          20        30        40        50        60
ACCUGCCCAGUGCUACU--|           ACGC   G       G       CGGUUUA 
                   GUUUGGUACUUA    GAG UUGCCUU GUAUAUU       U
                   CAAACUAUGAGU    CUC AACGGGA CAUAUAA       U
UUCUUCGAAGGGCCUGUUU^           GUCU   G       A       GGUGCAG 
120       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
To
Star sequence

Ete-Mir-154-P17_5p* (predicted)
mirBase accessionNone
Sequence 
0- CGCGAGGUUGCCUUGGUAUAUU -22
Get sequence
Mature sequence

Ete-Mir-154-P17_3p
mirBase accessionNone
Sequence 
40- UAUACAAGGGCAAGCUCUCUGU -62
Get sequence