MirGeneDB 3.0
MirGeneDB ID

Ete-Mir-154-P6a-v2

Family name MIR-154 (all species)
Seed CACAUUA
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues Ete-Mir-154-P1  Ete-Mir-154-P2-v1  Ete-Mir-154-P2-v2  Ete-Mir-154-P3-v1  Ete-Mir-154-P3-v2  Ete-Mir-154-P4  Ete-Mir-154-P5  Ete-Mir-154-P6a-v1  Ete-Mir-154-P7  Ete-Mir-154-P8a  Ete-Mir-154-P8b  Ete-Mir-154-P9  Ete-Mir-154-P10  Ete-Mir-154-P11  Ete-Mir-154-P12  Ete-Mir-154-P16  Ete-Mir-154-P17  Ete-Mir-154-P18  Ete-Mir-154-P19  Ete-Mir-154-P20  Ete-Mir-154-P21  Ete-Mir-154-P22  Ete-Mir-154-P23  Ete-Mir-154-P24  Ete-Mir-154-P26  Ete-Mir-154-P27  Ete-Mir-154-P28-v1  Ete-Mir-154-P28-v2  Ete-Mir-154-P29  Ete-Mir-154-P30  Ete-Mir-154-P31  Ete-Mir-154-P32  Ete-Mir-154-P33  Ete-Mir-154-P34 
Orthologues Bta-Mir-154-P6a-v1  Bta-Mir-154-P6a-v2  Cfa-Mir-154-P6a-v1  Cfa-Mir-154-P6a-v2  Cja-Mir-154-P6a  Cpo-Mir-154-P6a-v1  Cpo-Mir-154-P6a-v2  Dno-Mir-154-P6a-v1  Dno-Mir-154-P6a-v2  Eca-Mir-154-P6a-v1  Eca-Mir-154-P6a-v2  Hsa-Mir-154-P6a-v1  Hsa-Mir-154-P6a-v2  Laf-Mir-154-P6a  Mml-Mir-154-P6a-v1  Mml-Mir-154-P6a-v2  Mmr-Mir-154-P6a-v1  Mmr-Mir-154-P6a-v2  Mmu-Mir-154-P6a-v1  Mmu-Mir-154-P6a-v2  Ocu-Mir-154-P6a-v1  Ocu-Mir-154-P6a-v2  Pab-Mir-154-P6a-v1  Pab-Mir-154-P6a-v2  Rno-Mir-154-P6a-v1  Rno-Mir-154-P6a-v2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(echTel2)		 JH980297: 82311717-82311772 [-] UCSC
Precursor
(pre-Mir +30nt flank)
CAGCACUGCAGCUGCGUGGUACUUGGAGAGAGGUGGUCCGUGGCGCGUUCGCUUUCUUUAUGGCGCACAUUACAUGGUCGACCUCUUUGCAGUACCGAAUCCCGCCUUGCAAGCUU
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Structure
        10           20        30         40        50       
CAGCACUGCAGCUGCGU---|     U G        -  U     GCGC  U   UUUC 
                    GGUACU G AGAGAGGU GG CCGUG    GU CGC    U
                    CCAUGA C UUUCUCCA CU GGUAC    CA GCG    U
UUCGAACGUUCCGCCCUAAG^     - G        G  -     AUUA  C   GUAU 
    110       100         90        80         70        60
Deep sequencing
3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Ete-Mir-154-P6a-v2_5p* (predicted)
mirBase accessionNone
Sequence 
0- AGGUGGUCCGUGGCGCGUUCGC -22
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Mature sequence

Ete-Mir-154-P6a-v2_3p (predicted)
mirBase accessionNone
Sequence 
34- GCACAUUACAUGGUCGACCUCU -56
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