MirGeneDB 3.0
MirGeneDB ID

Ete-Mir-154-P31

Family name MIR-154 (all species)
Seed GGUCGAC
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues Ete-Mir-154-P1  Ete-Mir-154-P2-v1  Ete-Mir-154-P2-v2  Ete-Mir-154-P3-v1  Ete-Mir-154-P3-v2  Ete-Mir-154-P4  Ete-Mir-154-P5  Ete-Mir-154-P6a-v1  Ete-Mir-154-P6a-v2  Ete-Mir-154-P7  Ete-Mir-154-P8a  Ete-Mir-154-P8b  Ete-Mir-154-P9  Ete-Mir-154-P10  Ete-Mir-154-P11  Ete-Mir-154-P12  Ete-Mir-154-P16  Ete-Mir-154-P17  Ete-Mir-154-P18  Ete-Mir-154-P19  Ete-Mir-154-P20  Ete-Mir-154-P21  Ete-Mir-154-P22  Ete-Mir-154-P23  Ete-Mir-154-P24  Ete-Mir-154-P26  Ete-Mir-154-P27  Ete-Mir-154-P28-v1  Ete-Mir-154-P28-v2  Ete-Mir-154-P29  Ete-Mir-154-P30  Ete-Mir-154-P32  Ete-Mir-154-P33  Ete-Mir-154-P34 
Orthologues Bta-Mir-154-P31  Cfa-Mir-154-P31  Cja-Mir-154-P31  Cpo-Mir-154-P31  Dno-Mir-154-P31  Eca-Mir-154-P31  Hsa-Mir-154-P31  Laf-Mir-154-P31  Mml-Mir-154-P31  Mmr-Mir-154-P31  Mmu-Mir-154-P31  Pab-Mir-154-P31  Rno-Mir-154-P31 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(echTel2)		 JH980297: 82277759-82277814 [-] UCSC
Precursor
(pre-Mir +30nt flank)
UGCCACAACGCUCUGGGGUACGGGGAUGGCUGGUCGACCAGUUGGAAAGUAAUUUUUUAUAAUGUAUUUCACCUGGUCCACUAGCCAUCAGUGCCCACUGCAGCCUGCCGGGACCG
Get precursor sequence
Structure
        10        20            30        40        50       
UGCCACAACGCUCUGGGGUAC   ----|         C      U     AG  AUUUU 
                     GGG    GAUGGCUGGU GACCAG UGGAA  UA     \
                     CCC    CUACCGAUCA CUGGUC ACUUU  GU     U
GCCAGGGCCGUCCGACGUCA-   GUGA^         C      C     AU  AAUAU 
    110       100         90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
-   +
To
Mature sequence

Ete-Mir-154-P31_5p
mirBase accessionNone
Sequence 
0- UGGUCGACCAGUUGGAAAGUAAU -23
Get sequence
Star sequence

Ete-Mir-154-P31_3p*
mirBase accessionNone
Sequence 
34- UAUUUCACCUGGUCCACUAGCC -56
Get sequence