MirGeneDB 3.0
MirGeneDB ID

Ete-Mir-154-P23

Family name MIR-154 (all species)
Seed AUCAUAC
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues Ete-Mir-154-P1  Ete-Mir-154-P2-v1  Ete-Mir-154-P2-v2  Ete-Mir-154-P3-v1  Ete-Mir-154-P3-v2  Ete-Mir-154-P4  Ete-Mir-154-P5  Ete-Mir-154-P6a-v1  Ete-Mir-154-P6a-v2  Ete-Mir-154-P7  Ete-Mir-154-P8a  Ete-Mir-154-P8b  Ete-Mir-154-P9  Ete-Mir-154-P10  Ete-Mir-154-P11  Ete-Mir-154-P12  Ete-Mir-154-P16  Ete-Mir-154-P17  Ete-Mir-154-P18  Ete-Mir-154-P19  Ete-Mir-154-P20  Ete-Mir-154-P21  Ete-Mir-154-P22  Ete-Mir-154-P24  Ete-Mir-154-P26  Ete-Mir-154-P27  Ete-Mir-154-P28-v1  Ete-Mir-154-P28-v2  Ete-Mir-154-P29  Ete-Mir-154-P30  Ete-Mir-154-P31  Ete-Mir-154-P32  Ete-Mir-154-P33  Ete-Mir-154-P34 
Orthologues Bta-Mir-154-P23  Cfa-Mir-154-P23  Cja-Mir-154-P23  Cpo-Mir-154-P23  Dno-Mir-154-P23  Eca-Mir-154-P23  Hsa-Mir-154-P23  Laf-Mir-154-P23  Mml-Mir-154-P23  Mmr-Mir-154-P23  Ocu-Mir-154-P23  Pab-Mir-154-P23 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(echTel2)		 JH980297: 82289421-82289478 [-] UCSC
Precursor
(pre-Mir +30nt flank)
CUGUUCACGCGAGCCUUCGGUACUUAAAGAGUGGUUAUCCCUGCUGUGUUCGCUUUAUUUGUGACGAAUCAUACAGGGACAUCCAGUUUUUCAGUAUCAAAUACUGCUUUGGAGGGGG
Get precursor sequence
Structure
        10          20        30        40         50        
CUGUUCACGCGAGCCUUC--|     U     G   UUA      C    -    CUUUA 
                    GGUACU AAAGA UGG   UCCCUG UGUG UUCG     U
                    CUAUGA UUUUU ACC   AGGGAC AUAC AAGC     U
GGGGGAGGUUUCGUCAUAAA^     C     G   UAC      -    U    AGUGU 
      110       100        90        80         70        60
Deep sequencing
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Ete-Mir-154-P23_5p*
mirBase accessionNone
Sequence 
0- GUGGUUAUCCCUGCUGUGUUCG -22
Get sequence
Mature sequence

Ete-Mir-154-P23_3p
mirBase accessionNone
Sequence 
36- AAUCAUACAGGGACAUCCAGUU -58
Get sequence