MirGeneDB 2.1

MirGeneDB ID

Ete-Mir-154-P7

Family name MIR-154 (all species)
Seed GGUAGAC
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues Ete-Mir-154-P1  Ete-Mir-154-P2-v1  Ete-Mir-154-P2-v2  Ete-Mir-154-P3a-v1  Ete-Mir-154-P3a-v2  Ete-Mir-154-P4a  Ete-Mir-154-P4b  Ete-Mir-154-P5  Ete-Mir-154-P6  Ete-Mir-154-P8  Ete-Mir-154-P9  Ete-Mir-154-P10  Ete-Mir-154-P12  Ete-Mir-154-P13  Ete-Mir-154-P14  Ete-Mir-154-P16  Ete-Mir-154-P17  Ete-Mir-154-P18  Ete-Mir-154-P19  Ete-Mir-154-P20-v1  Ete-Mir-154-P20-v2  Ete-Mir-154-P21  Ete-Mir-154-P22  Ete-Mir-154-P24  Ete-Mir-154-P25  Ete-Mir-154-P26  Ete-Mir-154-P27  Ete-Mir-154-P28  Ete-Mir-154-P29  Ete-Mir-154-P30  Ete-Mir-154-P31  Ete-Mir-154-P32  Ete-Mir-154-P36 
Orthologues Bta-Mir-154-P7  Cfa-Mir-154-P7  Cpo-Mir-154-P7  Dno-Mir-154-P7  Hsa-Mir-154-P7  Mml-Mir-154-P7  Mmu-Mir-154-P7  Ocu-Mir-154-P7  Rno-Mir-154-P7 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(echTel2)
JH980297: 82315445-82315503 [-] UCSC
Precursor
(pre-Mir +30nt flank)
GUCAGUACCACUUCAUGGUUCCUGAAGAGAUGGUAGACUAUGGAACGUAGGCGUUAUGAUUUUUGACCUAUGUAACAUGGUCCACUAACUCUCAGGAUCCAAUCCAUCCUCGGAGGGCA
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Structure
        10           20        30        40        50         
GUCAGUACCACUUCAUGGU---|     A   A    A       GA       CGUUAUG 
                      UCCUGA GAG UGGU GACUAUG  ACGUAGG       \
                      AGGACU CUC AUCA CUGGUAC  UGUAUCC       A
ACGGGAGGCUCCUACCUAACCU^     -   A    C       AA       AGUUUUU 
       110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Mature sequence

Ete-Mir-154-P7_5p

mirBase accessionNone
Sequence
0- UGGUAGACUAUGGAACGUAGG -21
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Co-mature sequence

Ete-Mir-154-P7_3p

mirBase accessionNone
Sequence
38- UAUGUAACAUGGUCCACUAAC -59
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